Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC004866.1-201ENST00000411748 78 ntBASIC2.08□□□□□ -2.08
PRKNO60260 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.08□□□□□ -2.08
PRKNO60260 DPH3P2-201ENST00000422618 250 ntBASIC2.08□□□□□ -2.08
PRKNO60260 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.08□□□□□ -2.08
PRKNO60260 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.08□□□□□ -2.08
PRKNO60260 U8.20-201ENST00000459445 131 ntBASIC2.08□□□□□ -2.08
PRKNO60260 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.08□□□□□ -2.08
PRKNO60260 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
PRKNO60260 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.08□□□□□ -2.08
PRKNO60260 MZT1P2-201ENST00000604387 248 ntBASIC2.08□□□□□ -2.08
PRKNO60260 AL355297.2-201ENST00000604792 129 ntBASIC2.08□□□□□ -2.08
PRKNO60260 AC011476.5-201ENST00000615594 130 ntBASIC2.08□□□□□ -2.08
PRKNO60260 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PRKNO60260 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.08□□□□□ -2.08
PRKNO60260 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PRKNO60260 RNU1-76P-201ENST00000362903 159 ntBASIC2.07□□□□□ -2.08
PRKNO60260 Y_RNA.179-201ENST00000363844 90 ntBASIC2.07□□□□□ -2.08
PRKNO60260 SNORA67.1-201ENST00000364749 141 ntBASIC2.07□□□□□ -2.08
PRKNO60260 RNU6-26P-201ENST00000383985 107 ntBASIC2.07□□□□□ -2.08
PRKNO60260 RNU6-793P-201ENST00000384233 104 ntBASIC2.07□□□□□ -2.08
PRKNO60260 MIR329-1-201ENST00000385028 80 ntBASIC2.07□□□□□ -2.08
PRKNO60260 SNORD78.2-201ENST00000391076 69 ntBASIC2.07□□□□□ -2.08
PRKNO60260 AL023284.1-201ENST00000403956 276 ntBASIC2.07□□□□□ -2.08
PRKNO60260 AL033519.2-201ENST00000403958 392 ntBASIC2.07□□□□□ -2.08
PRKNO60260 RNU2-32P-201ENST00000411193 191 ntBASIC2.07□□□□□ -2.08
PRKNO60260 AC003685.2-201ENST00000422795 395 ntBASIC2.07□□□□□ -2.08
PRKNO60260 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.07□□□□□ -2.08
PRKNO60260 CBX3P6-201ENST00000430257 527 ntBASIC2.07□□□□□ -2.08
PRKNO60260 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.07□□□□□ -2.08
PRKNO60260 AC091179.3-201ENST00000474761 144 ntBASIC2.07□□□□□ -2.08
PRKNO60260 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.07□□□□□ -2.08
PRKNO60260 RNU6-397P-201ENST00000516226 104 ntBASIC2.07□□□□□ -2.08
PRKNO60260 RNU5F-4P-201ENST00000516581 114 ntBASIC2.07□□□□□ -2.08
PRKNO60260 RNU6-1098P-201ENST00000516772 96 ntBASIC2.07□□□□□ -2.08
PRKNO60260 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.07□□□□□ -2.08
PRKNO60260 AL117187.1-201ENST00000555482 181 ntBASIC2.07□□□□□ -2.08
PRKNO60260 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.07□□□□□ -2.08
PRKNO60260 AP000942.4-201ENST00000604811 241 ntBASIC2.07□□□□□ -2.08
PRKNO60260 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.07□□□□□ -2.08
PRKNO60260 MTND5P35-201ENST00000557537 1720 ntBASIC2.06□□□□□ -2.08
PRKNO60260 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
PRKNO60260 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.06□□□□□ -2.08
PRKNO60260 RNU5F-3P-201ENST00000363767 117 ntBASIC2.06□□□□□ -2.08
PRKNO60260 RNU6-743P-201ENST00000364151 106 ntBASIC2.06□□□□□ -2.08
PRKNO60260 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
PRKNO60260 RNU1-52P-201ENST00000384190 164 ntBASIC2.06□□□□□ -2.08
PRKNO60260 SNORA70B-201ENST00000384210 135 ntBASIC2.06□□□□□ -2.08
PRKNO60260 Y_RNA.551-201ENST00000384661 102 ntBASIC2.06□□□□□ -2.08
PRKNO60260 MIR95-201ENST00000385072 81 ntBASIC2.06□□□□□ -2.08
PRKNO60260 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.06□□□□□ -2.08
PRKNO60260 MIR1252-201ENST00000408861 65 ntBASIC2.06□□□□□ -2.08
PRKNO60260 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.06□□□□□ -2.08
PRKNO60260 AL121890.1-201ENST00000435457 205 ntBASIC2.06□□□□□ -2.08
PRKNO60260 RPEP5-201ENST00000441137 268 ntBASIC2.06□□□□□ -2.08
PRKNO60260 YWHAEP4-201ENST00000505390 198 ntBASIC2.06□□□□□ -2.08
PRKNO60260 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.06□□□□□ -2.08
PRKNO60260 Y_RNA.683-201ENST00000516508 93 ntBASIC2.06□□□□□ -2.08
PRKNO60260 RN7SKP49-201ENST00000516675 260 ntBASIC2.06□□□□□ -2.08
PRKNO60260 RNU1-117P-201ENST00000517041 158 ntBASIC2.06□□□□□ -2.08
PRKNO60260 AC131281.1-201ENST00000522984 164 ntBASIC2.06□□□□□ -2.08
PRKNO60260 MIR4659A-201ENST00000580269 81 ntBASIC2.06□□□□□ -2.08
PRKNO60260 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.06□□□□□ -2.08
PRKNO60260 AL357075.2-201ENST00000614906 189 ntBASIC2.06□□□□□ -2.08
PRKNO60260 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.06□□□□□ -2.08
PRKNO60260 ZNF271P-202ENST00000465539 1970 ntBASIC2.06□□□□□ -2.08
PRKNO60260 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PRKNO60260 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
PRKNO60260 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PRKNO60260 U8.2-201ENST00000363156 134 ntBASIC2.05□□□□□ -2.08
PRKNO60260 Y_RNA.210-201ENST00000364161 110 ntBASIC2.05□□□□□ -2.08
PRKNO60260 RNU6-234P-201ENST00000365229 104 ntBASIC2.05□□□□□ -2.08
PRKNO60260 Y_RNA.380-201ENST00000365663 111 ntBASIC2.05□□□□□ -2.08
PRKNO60260 Y_RNA.458-201ENST00000384240 102 ntBASIC2.05□□□□□ -2.08
PRKNO60260 RNU6-1145P-201ENST00000384246 107 ntBASIC2.05□□□□□ -2.08
PRKNO60260 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
PRKNO60260 Y_RNA.595-201ENST00000410403 105 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKNO60260 SDAD1P3-201ENST00000427380 333 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AL356320.1-201ENST00000429616 163 ntBASIC2.05□□□□□ -2.08
PRKNO60260 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKNO60260 IFNA11P-201ENST00000446352 526 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AC009237.7-201ENST00000447357 229 ntBASIC2.05□□□□□ -2.08
PRKNO60260 RNU7-26P-201ENST00000458980 63 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AC010655.3-201ENST00000478818 450 ntBASIC2.05□□□□□ -2.08
PRKNO60260 RPS23P5-201ENST00000495419 428 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.05□□□□□ -2.08
PRKNO60260 MRPS35P2-201ENST00000508242 191 ntBASIC2.05□□□□□ -2.08
PRKNO60260 RNU6-1012P-201ENST00000516606 109 ntBASIC2.05□□□□□ -2.08
PRKNO60260 SNORA48.11-201ENST00000517015 89 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AC034114.1-201ENST00000520293 285 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AC018630.3-201ENST00000542637 96 ntBASIC2.05□□□□□ -2.08
PRKNO60260 RRN3P3-201ENST00000549207 578 ntBASIC2.05□□□□□ -2.08
PRKNO60260 MIR4658-201ENST00000584344 65 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AL355297.3-201ENST00000604082 446 ntBASIC2.05□□□□□ -2.08
PRKNO60260 RAC1P9-201ENST00000604990 392 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AL121655.1-201ENST00000605811 308 ntBASIC2.05□□□□□ -2.08
PRKNO60260 AC240442.1-201ENST00000616055 283 ntBASIC2.05□□□□□ -2.08
PRKNO60260 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.05□□□□□ -2.08
PRKNO60260 RNU1-62P-201ENST00000362599 164 ntBASIC2.04□□□□□ -2.08
PRKNO60260 SNORA38-201ENST00000363946 132 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms