Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 RNU6-1026P-201ENST00000384465 108 ntBASIC2.59□□□□□ -1.99
RRP9O43818 RNU6-713P-201ENST00000384761 107 ntBASIC2.59□□□□□ -1.99
RRP9O43818 MIR561-201ENST00000385216 97 ntBASIC2.59□□□□□ -1.99
RRP9O43818 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.59□□□□□ -1.99
RRP9O43818 RNU7-14P-201ENST00000459331 62 ntBASIC2.59□□□□□ -1.99
RRP9O43818 RNU6-625P-201ENST00000459412 107 ntBASIC2.59□□□□□ -1.99
RRP9O43818 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.59□□□□□ -1.99
RRP9O43818 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RRP9O43818 SNORA74D-201ENST00000516404 141 ntBASIC2.59□□□□□ -1.99
RRP9O43818 AC018448.1-201ENST00000552843 316 ntBASIC2.59□□□□□ -1.99
RRP9O43818 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.59□□□□□ -1.99
RRP9O43818 MIR3935-201ENST00000583472 104 ntBASIC2.59□□□□□ -1.99
RRP9O43818 AC008873.1-201ENST00000625051 138 ntBASIC2.59□□□□□ -1.99
RRP9O43818 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.59□□□□□ -1.99
RRP9O43818 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
RRP9O43818 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
RRP9O43818 Y_RNA.19-201ENST00000362462 99 ntBASIC2.58□□□□□ -2
RRP9O43818 Y_RNA.143-201ENST00000363520 106 ntBASIC2.58□□□□□ -2
RRP9O43818 RNVU1-14-201ENST00000384770 164 ntBASIC2.58□□□□□ -2
RRP9O43818 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
RRP9O43818 MIR1302-3-201ENST00000408128 138 ntBASIC2.58□□□□□ -2
RRP9O43818 RNA5SP504-201ENST00000410676 117 ntBASIC2.58□□□□□ -2
RRP9O43818 RNU4-47P-201ENST00000410876 114 ntBASIC2.58□□□□□ -2
RRP9O43818 DYNLT3P2-201ENST00000442517 295 ntBASIC2.58□□□□□ -2
RRP9O43818 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.58□□□□□ -2
RRP9O43818 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.58□□□□□ -2
RRP9O43818 AC109925.1-201ENST00000478069 331 ntBASIC2.58□□□□□ -2
RRP9O43818 RNU6-408P-201ENST00000515910 100 ntBASIC2.58□□□□□ -2
RRP9O43818 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.58□□□□□ -2
RRP9O43818 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.58□□□□□ -2
RRP9O43818 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.58□□□□□ -2
RRP9O43818 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.58□□□□□ -2
RRP9O43818 MIR376A1-201ENST00000616574 68 ntBASIC2.58□□□□□ -2
RRP9O43818 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RRP9O43818 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
RRP9O43818 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
RRP9O43818 RNU6-961P-201ENST00000363893 105 ntBASIC2.57□□□□□ -2
RRP9O43818 RNU6-196P-201ENST00000384315 107 ntBASIC2.57□□□□□ -2
RRP9O43818 Y_RNA.498-201ENST00000384460 102 ntBASIC2.57□□□□□ -2
RRP9O43818 MIR586-201ENST00000385035 97 ntBASIC2.57□□□□□ -2
RRP9O43818 AL357139.1-201ENST00000407792 426 ntBASIC2.57□□□□□ -2
RRP9O43818 AC005326.1-201ENST00000429197 123 ntBASIC2.57□□□□□ -2
RRP9O43818 AC005002.2-201ENST00000438228 269 ntBASIC2.57□□□□□ -2
RRP9O43818 ATP5EP1-201ENST00000510257 156 ntBASIC2.57□□□□□ -2
RRP9O43818 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.57□□□□□ -2
RRP9O43818 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.57□□□□□ -2
RRP9O43818 MIR5680-201ENST00000577577 84 ntBASIC2.57□□□□□ -2
RRP9O43818 AC008749.1-201ENST00000597650 306 ntBASIC2.57□□□□□ -2
RRP9O43818 AC007179.3-201ENST00000604976 235 ntBASIC2.57□□□□□ -2
RRP9O43818 AC096577.2-201ENST00000611455 153 ntBASIC2.57□□□□□ -2
RRP9O43818 U4atac.1-201ENST00000618345 95 ntBASIC2.57□□□□□ -2
RRP9O43818 7SK.10-201ENST00000621414 298 ntBASIC2.57□□□□□ -2
RRP9O43818 MIR1248-201ENST00000629190 106 ntBASIC2.57□□□□□ -2
RRP9O43818 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RRP9O43818 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.57□□□□□ -2
RRP9O43818 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.57□□□□□ -2
RRP9O43818 LINC02555-201ENST00000563933 1951 ntBASIC2.56□□□□□ -2
RRP9O43818 RNU6-1305P-201ENST00000364353 104 ntBASIC2.56□□□□□ -2
RRP9O43818 SNORD87-201ENST00000364849 89 ntBASIC2.56□□□□□ -2
RRP9O43818 SNORD31B-201ENST00000364977 69 ntBASIC2.56□□□□□ -2
RRP9O43818 Y_RNA.462-201ENST00000384268 102 ntBASIC2.56□□□□□ -2
RRP9O43818 SNORA67.2-201ENST00000384300 149 ntBASIC2.56□□□□□ -2
RRP9O43818 RNU6-463P-201ENST00000384340 107 ntBASIC2.56□□□□□ -2
RRP9O43818 MIR1283-1-201ENST00000408494 87 ntBASIC2.56□□□□□ -2
RRP9O43818 ELOCP21-201ENST00000412558 336 ntBASIC2.56□□□□□ -2
RRP9O43818 RAB28P5-201ENST00000427490 651 ntBASIC2.56□□□□□ -2
RRP9O43818 LINC01399-202ENST00000458450 244 ntBASIC2.56□□□□□ -2
RRP9O43818 AC025465.3-201ENST00000510570 311 ntBASIC2.56□□□□□ -2
RRP9O43818 AK6P2-201ENST00000549020 471 ntBASIC2.56□□□□□ -2
RRP9O43818 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.56□□□□□ -2
RRP9O43818 AC136932.1-201ENST00000574771 208 ntBASIC2.56□□□□□ -2
RRP9O43818 MIR4300-201ENST00000581016 96 ntBASIC2.56□□□□□ -2
RRP9O43818 SNORD14A-201ENST00000606526 91 ntBASIC2.56□□□□□ -2
RRP9O43818 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.56□□□□□ -2
RRP9O43818 SDR42E1P4-201ENST00000620894 481 ntBASIC2.56□□□□□ -2
RRP9O43818 AC073346.2-201ENST00000624724 2058 ntBASIC2.56□□□□□ -2
RRP9O43818 RNU6-626P-201ENST00000363354 107 ntBASIC2.55□□□□□ -2
RRP9O43818 SNORA3A-201ENST00000364113 130 ntBASIC2.55□□□□□ -2
RRP9O43818 RNU6-806P-201ENST00000365147 105 ntBASIC2.55□□□□□ -2
RRP9O43818 RNU6-1264P-201ENST00000383891 107 ntBASIC2.55□□□□□ -2
RRP9O43818 RNU6-20P-201ENST00000384106 107 ntBASIC2.55□□□□□ -2
RRP9O43818 SNORD63-201ENST00000384262 68 ntBASIC2.55□□□□□ -2
RRP9O43818 MIR568-201ENST00000385036 95 ntBASIC2.55□□□□□ -2
RRP9O43818 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.55□□□□□ -2
RRP9O43818 RPL23AP7-203ENST00000449021 469 ntBASIC2.55□□□□□ -2
RRP9O43818 NDUFB4P10-201ENST00000452541 359 ntBASIC2.55□□□□□ -2
RRP9O43818 AC114982.1-201ENST00000469402 321 ntBASIC2.55□□□□□ -2
RRP9O43818 HMGN2P9-201ENST00000476875 229 ntBASIC2.55□□□□□ -2
RRP9O43818 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
RRP9O43818 RNU6-107P-201ENST00000516643 102 ntBASIC2.55□□□□□ -2
RRP9O43818 RNA5SP490-201ENST00000517141 136 ntBASIC2.55□□□□□ -2
RRP9O43818 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.55□□□□□ -2
RRP9O43818 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.55□□□□□ -2
RRP9O43818 MIR5195-201ENST00000583555 115 ntBASIC2.55□□□□□ -2
RRP9O43818 MIR4753-201ENST00000585119 83 ntBASIC2.55□□□□□ -2
RRP9O43818 AC005176.2-201ENST00000596933 147 ntBASIC2.55□□□□□ -2
RRP9O43818 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.55□□□□□ -2
RRP9O43818 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RRP9O43818 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.54□□□□□ -2
RRP9O43818 RNU6-545P-201ENST00000362681 104 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms