Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3BM21 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
H3BM21 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
H3BM21 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3BM21 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4□□□□□ -1.77
H3BM21 AL161912.2-201ENST00000565707 3007 ntBASIC4□□□□□ -1.77
H3BM21 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4□□□□□ -1.77
H3BM21 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4□□□□□ -1.77
H3BM21 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
H3BM21 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
H3BM21 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4□□□□□ -1.77
H3BM21 RNU6-1305P-201ENST00000364353 104 ntBASIC4□□□□□ -1.77
H3BM21 Y_RNA.565-201ENST00000384719 101 ntBASIC4□□□□□ -1.77
H3BM21 AC096949.1-201ENST00000412047 152 ntBASIC4□□□□□ -1.77
H3BM21 BTF3P4-201ENST00000418852 495 ntBASIC4□□□□□ -1.77
H3BM21 AC245291.1-201ENST00000419501 328 ntBASIC4□□□□□ -1.77
H3BM21 AL445584.1-201ENST00000431451 330 ntBASIC4□□□□□ -1.77
H3BM21 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4□□□□□ -1.77
H3BM21 AC109329.2-201ENST00000519658 482 ntBASIC4□□□□□ -1.77
H3BM21 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4□□□□□ -1.77
H3BM21 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4□□□□□ -1.77
H3BM21 MIR4444-1-201ENST00000581696 74 ntBASIC4□□□□□ -1.77
H3BM21 MIR4444-2-201ENST00000584390 74 ntBASIC4□□□□□ -1.77
H3BM21 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4□□□□□ -1.77
H3BM21 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4□□□□□ -1.77
H3BM21 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4□□□□□ -1.77
H3BM21 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
H3BM21 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4□□□□□ -1.77
H3BM21 AC058791.1-201ENST00000608412 3198 ntBASIC4□□□□□ -1.77
H3BM21 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
H3BM21 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
H3BM21 SNORA7.2-201ENST00000364446 145 ntBASIC3.99□□□□□ -1.77
H3BM21 SNORD115-35-201ENST00000365122 82 ntBASIC3.99□□□□□ -1.77
H3BM21 SNORA70.4-201ENST00000365509 134 ntBASIC3.99□□□□□ -1.77
H3BM21 PTMAP2-201ENST00000397627 327 ntBASIC3.99□□□□□ -1.77
H3BM21 RNA5SP511-201ENST00000410487 115 ntBASIC3.99□□□□□ -1.77
H3BM21 HMGN2P20-201ENST00000437531 273 ntBASIC3.99□□□□□ -1.77
H3BM21 AC078918.1-201ENST00000498515 228 ntBASIC3.99□□□□□ -1.77
H3BM21 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.99□□□□□ -1.77
H3BM21 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.99□□□□□ -1.77
H3BM21 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
H3BM21 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
H3BM21 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
H3BM21 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3BM21 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3BM21 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
H3BM21 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3BM21 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
H3BM21 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.98□□□□□ -1.77
H3BM21 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
H3BM21 FAM35CP-201ENST00000554755 2470 ntBASIC3.98□□□□□ -1.77
H3BM21 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.98□□□□□ -1.77
H3BM21 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
H3BM21 RNU6-170P-201ENST00000362832 104 ntBASIC3.98□□□□□ -1.77
H3BM21 RNU6-1209P-201ENST00000363655 107 ntBASIC3.98□□□□□ -1.77
H3BM21 RNU6-884P-201ENST00000363889 107 ntBASIC3.98□□□□□ -1.77
H3BM21 Y_RNA.190-201ENST00000363964 101 ntBASIC3.98□□□□□ -1.77
H3BM21 Y_RNA.796-201ENST00000364268 102 ntBASIC3.98□□□□□ -1.77
H3BM21 Y_RNA.799-201ENST00000364992 102 ntBASIC3.98□□□□□ -1.77
H3BM21 RNU6-690P-201ENST00000365242 106 ntBASIC3.98□□□□□ -1.77
H3BM21 RNU6-217P-201ENST00000384164 104 ntBASIC3.98□□□□□ -1.77
H3BM21 snoU13.4-201ENST00000458916 104 ntBASIC3.98□□□□□ -1.77
H3BM21 SNORA70.14-201ENST00000516205 110 ntBASIC3.98□□□□□ -1.77
H3BM21 RNA5SP309-201ENST00000516670 106 ntBASIC3.98□□□□□ -1.77
H3BM21 RNU6-1073P-201ENST00000517182 106 ntBASIC3.98□□□□□ -1.77
H3BM21 SUMO2P16-201ENST00000519475 264 ntBASIC3.98□□□□□ -1.77
H3BM21 AC244505.7-201ENST00000599675 272 ntBASIC3.98□□□□□ -1.77
H3BM21 MIR6868-201ENST00000611215 58 ntBASIC3.98□□□□□ -1.77
H3BM21 MIR4727-201ENST00000622232 55 ntBASIC3.98□□□□□ -1.77
H3BM21 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.98□□□□□ -1.77
H3BM21 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
H3BM21 AC017071.1-201ENST00000564407 2204 ntBASIC3.98□□□□□ -1.77
H3BM21 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
H3BM21 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
H3BM21 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
H3BM21 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
H3BM21 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
H3BM21 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
H3BM21 MIR181A2-201ENST00000384863 110 ntBASIC3.97□□□□□ -1.77
H3BM21 MIR200C-201ENST00000384980 68 ntBASIC3.97□□□□□ -1.77
H3BM21 PTMAP5-201ENST00000393073 333 ntBASIC3.97□□□□□ -1.77
H3BM21 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.97□□□□□ -1.77
H3BM21 AC245102.2-201ENST00000448956 180 ntBASIC3.97□□□□□ -1.77
H3BM21 RN7SL271P-201ENST00000487601 295 ntBASIC3.97□□□□□ -1.77
H3BM21 RNA5SP143-201ENST00000516936 115 ntBASIC3.97□□□□□ -1.77
H3BM21 ACA59.2-201ENST00000517061 156 ntBASIC3.97□□□□□ -1.77
H3BM21 RNU6-1270P-201ENST00000517128 108 ntBASIC3.97□□□□□ -1.77
H3BM21 RN7SKP57-201ENST00000517248 293 ntBASIC3.97□□□□□ -1.77
H3BM21 MIR3163-201ENST00000581592 73 ntBASIC3.97□□□□□ -1.77
H3BM21 AC006160.2-201ENST00000637708 154 ntBASIC3.97□□□□□ -1.77
H3BM21 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
H3BM21 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
H3BM21 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
H3BM21 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
H3BM21 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
H3BM21 RNU4-15P-201ENST00000362613 141 ntBASIC3.96□□□□□ -1.78
H3BM21 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.96□□□□□ -1.78
H3BM21 SNORA33-201ENST00000363664 130 ntBASIC3.96□□□□□ -1.78
H3BM21 Y_RNA.298-201ENST00000364960 107 ntBASIC3.96□□□□□ -1.78
H3BM21 RNA5SP97-201ENST00000365006 84 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms