Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 MIR7975-201ENST00000619350 68 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 SNORA71.3-201ENST00000362582 128 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 RNU4-80P-201ENST00000363200 141 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.217-201ENST00000364214 105 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-975P-201ENST00000384296 105 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-220P-201ENST00000390919 107 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 MIR1298-201ENST00000408783 112 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.590-201ENST00000410140 107 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 RNU2-61P-201ENST00000411069 191 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 AL513477.1-202ENST00000417061 214 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 AC003685.2-201ENST00000422795 395 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 AC016925.1-201ENST00000458303 298 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.641-201ENST00000459414 105 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 RNU7-57P-201ENST00000459540 60 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 DEFB117-201ENST00000602356 141 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 AC005828.6-201ENST00000606610 232 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 MIR6075-201ENST00000620782 95 ntBASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHA9Q9Y5H5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-324P-201ENST00000363957 106 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-1289P-201ENST00000384431 106 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 MIR7-3-201ENST00000384898 110 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 AL357139.1-201ENST00000407792 426 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 HMGN2P18-201ENST00000450680 270 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 MIR3145-201ENST00000580727 82 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 MIR1248-201ENST00000629190 106 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 U6.115-201ENST00000636045 103 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 AC093010.3-201ENST00000570269 15214 ntBASIC3.03□□□□□ -1.92
PCDHA9Q9Y5H5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 SNORD114-7-201ENST00000362520 77 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.83-201ENST00000363005 113 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 RNY4P28-201ENST00000365281 93 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.361-201ENST00000365515 120 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-438P-201ENST00000365561 103 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 MIR561-201ENST00000385216 97 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 AL031003.1-201ENST00000404229 172 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-710P-201ENST00000410424 105 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 AC104332.2-201ENST00000429959 156 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 AC244505.4-201ENST00000434905 287 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 SSXP5-201ENST00000443473 287 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 AL138752.1-201ENST00000452964 351 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 SNORD2.1-201ENST00000458762 69 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 AC091153.1-201ENST00000466297 402 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 RN7SKP43-201ENST00000516173 320 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-948P-201ENST00000516374 107 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.679-201ENST00000516416 91 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-182P-201ENST00000516970 105 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 MIR3117-201ENST00000584034 78 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 uc_338.25-201ENST00000613756 156 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 AL449363.1-201ENST00000617815 186 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 AC012314.7-201ENST00000619693 93 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 snoZ196.1-201ENST00000625269 89 ntBASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDHA9Q9Y5H5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.29-201ENST00000362570 113 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.199-201ENST00000364014 102 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.292-201ENST00000364904 97 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.297-201ENST00000364950 91 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 AL139095.1-201ENST00000404326 391 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.638-201ENST00000459374 113 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-221P-201ENST00000459541 99 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 RPS29P2-201ENST00000479278 136 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 RNU6-965P-201ENST00000516721 96 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 SNORA81.3-201ENST00000517283 198 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 AL355297.2-201ENST00000604792 129 ntBASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHA9Q9Y5H5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.117-201ENST00000363294 101 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 RNU1-23P-201ENST00000363361 144 ntBASIC3□□□□□ -1.93
PCDHA9Q9Y5H5 Y_RNA.274-201ENST00000364714 101 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 757 ms