Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU4-35P-201ENST00000362588 141 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 SNORA62.3-201ENST00000365110 153 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 Y_RNA.563-201ENST00000384707 108 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 MIR218-2-201ENST00000385006 110 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 MIR586-201ENST00000385035 97 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 SNORD17-201ENST00000390930 237 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 PTMAP2-201ENST00000397627 327 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 RBMY2UP-201ENST00000453474 324 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 RNU4-57P-201ENST00000515980 135 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 AP001340.1-201ENST00000624405 217 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 AC110774.1-201ENST00000623567 2018 ntBASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
AP4E1Q9UPM8 AL136164.4-201ENST00000625013 2135 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 Y_RNA.251-201ENST00000364551 99 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 U8.7-201ENST00000364940 136 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 RNU6-728P-201ENST00000365375 104 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 Y_RNA.393-201ENST00000383936 102 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 RNU4-43P-201ENST00000410628 137 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 RNU2-52P-201ENST00000410680 190 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 AC112771.1-201ENST00000463581 102 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 RPL23AP67-201ENST00000465341 474 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 HMGN2P9-201ENST00000476875 229 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 AC107934.2-201ENST00000518653 310 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 AC011603.4-201ENST00000611325 277 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 MIR548AY-201ENST00000617669 107 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 U6.98-201ENST00000637157 84 ntBASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
AP4E1Q9UPM8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 MIR30E-201ENST00000362104 92 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 SNORD114-7-201ENST00000362520 77 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 SNORD32B-201ENST00000364460 84 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 RN7SKP111-201ENST00000410349 271 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 RNU6-383P-201ENST00000410864 94 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 HMGN2P31-201ENST00000432430 273 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 RPL23AP7-203ENST00000449021 469 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 RNU7-115P-201ENST00000516433 55 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 HSPE1P18-201ENST00000517602 280 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 AC079598.5-201ENST00000547460 117 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 U3.45-201ENST00000607547 219 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 AL138880.2-201ENST00000616214 239 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 AF117829.1-206ENST00000621883 3802 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 AC091152.2-201ENST00000591628 2569 ntBASIC3.54□□□□□ -1.84
AP4E1Q9UPM8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 SNORA48.7-201ENST00000391302 135 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 AL139095.1-201ENST00000404326 391 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 MIR1185-2-201ENST00000408687 86 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 RNA5SP38-201ENST00000410750 119 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 RPS27P1-201ENST00000450552 247 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 AC006445.1-201ENST00000491925 405 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 FCF1P8-201ENST00000510322 597 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 MIR3158-1-201ENST00000583596 81 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 SNORA51-201ENST00000606420 132 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 U7.2-201ENST00000607576 63 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 RMST_8.1-201ENST00000610287 165 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 MIR6844-201ENST00000637122 62 ntBASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
AP4E1Q9UPM8 CENPCP1-201ENST00000533085 2578 ntBASIC3.53□□□□□ -1.85
AP4E1Q9UPM8 AL159152.1-201ENST00000635019 2587 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 RNA5SP295-201ENST00000362655 121 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 RNU6-1305P-201ENST00000364353 104 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 SNORD116-13-201ENST00000384408 92 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 MIR200C-201ENST00000384980 68 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 MIR873-201ENST00000401120 77 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 AL355796.1-201ENST00000406706 323 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 MIR1278-201ENST00000408753 81 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 RNU6-588P-201ENST00000410281 105 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms