Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SNRPGP8-201ENST00000454064 226 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 SNORD65B-201ENST00000459126 73 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 RNU4-57P-201ENST00000515980 135 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 RNU1-143P-201ENST00000516296 146 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.41□□□□□ -1.86
SSU72Q9NP77 RPL30P11-203ENST00000598995 310 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 U1.23-201ENST00000610293 146 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 RNU1-68P-201ENST00000615382 146 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 U1.39-201ENST00000621562 146 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 MIR6844-201ENST00000637122 62 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.41□□□□□ -1.86
SSU72Q9NP77 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.41□□□□□ -1.86
SSU72Q9NP77 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SSU72Q9NP77 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
SSU72Q9NP77 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SSU72Q9NP77 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SSU72Q9NP77 OTUD4P1-201ENST00000237841 3067 ntBASIC3.4□□□□□ -1.86
SSU72Q9NP77 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SSU72Q9NP77 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.4□□□□□ -1.86
SSU72Q9NP77 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.4□□□□□ -1.86
SSU72Q9NP77 MIR367-201ENST00000362299 68 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 SNORA27.1-201ENST00000362604 124 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 RNU6-728P-201ENST00000365375 104 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 Y_RNA.525-201ENST00000384570 113 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
SSU72Q9NP77 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SSU72Q9NP77 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSU72Q9NP77 AP000567.1-201ENST00000406413 156 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 MIR1283-1-201ENST00000408494 87 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 CYCSP49-201ENST00000420810 319 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 AL117339.2-201ENST00000430475 180 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.4□□□□□ -1.87
SSU72Q9NP77 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.4□□□□□ -1.87
SSU72Q9NP77 RBMY2UP-201ENST00000453474 324 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 AL031183.1-201ENST00000457667 207 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 RNU7-57P-201ENST00000459540 60 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.4□□□□□ -1.87
SSU72Q9NP77 RNU5F-4P-201ENST00000516581 114 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.4□□□□□ -1.87
SSU72Q9NP77 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSU72Q9NP77 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.4□□□□□ -1.87
SSU72Q9NP77 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.4□□□□□ -1.87
SSU72Q9NP77 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSU72Q9NP77 AL159152.1-201ENST00000635019 2587 ntBASIC3.4□□□□□ -1.87
SSU72Q9NP77 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSU72Q9NP77 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSU72Q9NP77 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SSU72Q9NP77 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSU72Q9NP77 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSU72Q9NP77 Y_RNA.393-201ENST00000383936 102 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 RNU6-1323P-201ENST00000384025 107 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 SNORD14D-201ENST00000384390 87 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 RNU1-13P-201ENST00000384499 162 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 Y_RNA.563-201ENST00000384707 108 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 AC009414.1-201ENST00000427200 443 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SSU72Q9NP77 ATP5EP1-201ENST00000510257 156 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.39□□□□□ -1.87
SSU72Q9NP77 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 AC127455.1-201ENST00000565496 145 ntBASIC3.39□□□□□ -1.87
SSU72Q9NP77 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SSU72Q9NP77 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSU72Q9NP77 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSU72Q9NP77 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 AC110774.1-201ENST00000623567 2018 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSU72Q9NP77 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSU72Q9NP77 SNORD9-201ENST00000362566 104 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 RNU1-72P-201ENST00000362976 153 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 RNU6-944P-201ENST00000364023 107 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 RNU6-153P-201ENST00000364422 104 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 RNU6-1082P-201ENST00000364574 107 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 RNU6-1180P-201ENST00000364935 107 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 MIR518C-201ENST00000384822 101 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 ATP5A1P2-201ENST00000412323 255 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 AL358232.1-201ENST00000448030 501 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 RNU7-14P-201ENST00000459331 62 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 RPS29P2-201ENST00000479278 136 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 RNA5SP217-201ENST00000515959 91 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSU72Q9NP77 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSU72Q9NP77 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSU72Q9NP77 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSU72Q9NP77 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 CENPCP1-201ENST00000533085 2578 ntBASIC3.38□□□□□ -1.87
SSU72Q9NP77 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSU72Q9NP77 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.38□□□□□ -1.87
SSU72Q9NP77 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms