Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AL110115.1-201ENST00000614396 364 ntBASIC6.9□□□□□ -1.3
SCAF1Q9H7N4 MIR7154-201ENST00000620673 73 ntBASIC6.9□□□□□ -1.3
SCAF1Q9H7N4 AP001005.3-201ENST00000622049 129 ntBASIC6.9□□□□□ -1.3
SCAF1Q9H7N4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
SCAF1Q9H7N4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
SCAF1Q9H7N4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.9□□□□□ -1.31
SCAF1Q9H7N4 MAPK10-303ENST00000641324 3959 ntBASIC6.9□□□□□ -1.31
SCAF1Q9H7N4 AC008264.2-201ENST00000610193 3731 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 5S_rRNA.1-201ENST00000364415 116 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 PTMAP2-201ENST00000397627 327 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 Z92545.1-201ENST00000411782 234 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 FTH1P12-201ENST00000432137 551 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 RPS29P9-201ENST00000440360 171 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 AC084357.1-201ENST00000473404 255 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 TRAV8-5-201ENST00000537369 341 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 Y_RNA.386-201ENST00000383913 105 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 MIR522-201ENST00000385071 87 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 SNORA59A-201ENST00000459326 152 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 FAM27B-201ENST00000610601 213 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 AC090517.3-201ENST00000625170 141 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 DHX9P1-201ENST00000436565 3076 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 OR56B2P-202ENST00000641377 2453 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 AC007656.2-201ENST00000624902 4547 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RNU4-32P-201ENST00000363404 141 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RNU1-13P-201ENST00000384499 162 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 HMGN2P31-201ENST00000432430 273 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 AC069285.2-201ENST00000440210 275 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 SCARNA18B-201ENST00000458806 135 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RN7SL303P-201ENST00000469773 251 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RN7SL441P-201ENST00000492388 296 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 Y_RNA.171-201ENST00000363760 102 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 RNU6-268P-201ENST00000364174 107 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 RNU6-442P-201ENST00000383968 104 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 MIR93-201ENST00000385024 80 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 SNORA40.18-201ENST00000391200 128 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 SNORA77-201ENST00000408716 125 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 RNU6-1186P-201ENST00000410429 97 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 POLR2J4-204ENST00000418424 324 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 SNORA31.4-201ENST00000516049 129 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 AC021613.1-201ENST00000623880 111 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 AL136964.1-201ENST00000622038 2990 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 SPRR2C-201ENST00000290702 219 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 MIR448-201ENST00000362131 111 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP502-201ENST00000362694 119 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 Y_RNA.267-201ENST00000364679 109 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 SNORA2.3-201ENST00000383920 135 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 RNU6-411P-201ENST00000384451 107 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 AL450471.1-201ENST00000447509 127 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 PRSS3P4-201ENST00000453323 162 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 RNU7-113P-201ENST00000459273 62 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 SEPT14P17-201ENST00000617978 177 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 SNORA70.10-201ENST00000384515 134 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP317-201ENST00000410176 116 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RN7SKP177-201ENST00000410567 355 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP311-201ENST00000411290 116 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 AL162591.2-201ENST00000449634 317 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP315-201ENST00000516340 116 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNU7-153P-201ENST00000516455 62 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP312-201ENST00000517068 116 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms