Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AL110115.1-201ENST00000614396 364 ntBASIC6.9□□□□□ -1.3
SCAF1Q9H7N4 MIR7154-201ENST00000620673 73 ntBASIC6.9□□□□□ -1.3
SCAF1Q9H7N4 AP001005.3-201ENST00000622049 129 ntBASIC6.9□□□□□ -1.3
SCAF1Q9H7N4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
SCAF1Q9H7N4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
SCAF1Q9H7N4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.9□□□□□ -1.31
SCAF1Q9H7N4 MAPK10-303ENST00000641324 3959 ntBASIC6.9□□□□□ -1.31
SCAF1Q9H7N4 AC008264.2-201ENST00000610193 3731 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 5S_rRNA.1-201ENST00000364415 116 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 PTMAP2-201ENST00000397627 327 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 Z92545.1-201ENST00000411782 234 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 FTH1P12-201ENST00000432137 551 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 RPS29P9-201ENST00000440360 171 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 AC084357.1-201ENST00000473404 255 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 TRAV8-5-201ENST00000537369 341 ntBASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SCAF1Q9H7N4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 Y_RNA.386-201ENST00000383913 105 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 MIR522-201ENST00000385071 87 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 SNORA59A-201ENST00000459326 152 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 FAM27B-201ENST00000610601 213 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 AC090517.3-201ENST00000625170 141 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 DHX9P1-201ENST00000436565 3076 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 OR56B2P-202ENST00000641377 2453 ntBASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCAF1Q9H7N4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 AC007656.2-201ENST00000624902 4547 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RNU4-32P-201ENST00000363404 141 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RNU1-13P-201ENST00000384499 162 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 HMGN2P31-201ENST00000432430 273 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 AC069285.2-201ENST00000440210 275 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 SCARNA18B-201ENST00000458806 135 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RN7SL303P-201ENST00000469773 251 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 RN7SL441P-201ENST00000492388 296 ntBASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCAF1Q9H7N4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 Y_RNA.171-201ENST00000363760 102 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 RNU6-268P-201ENST00000364174 107 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 RNU6-442P-201ENST00000383968 104 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 MIR93-201ENST00000385024 80 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 SNORA40.18-201ENST00000391200 128 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 SNORA77-201ENST00000408716 125 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 RNU6-1186P-201ENST00000410429 97 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 POLR2J4-204ENST00000418424 324 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 SNORA31.4-201ENST00000516049 129 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 AC021613.1-201ENST00000623880 111 ntBASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.86□□□□□ -1.31
SCAF1Q9H7N4 AL136964.1-201ENST00000622038 2990 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 SPRR2C-201ENST00000290702 219 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 MIR448-201ENST00000362131 111 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP502-201ENST00000362694 119 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 Y_RNA.267-201ENST00000364679 109 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 SNORA2.3-201ENST00000383920 135 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 RNU6-411P-201ENST00000384451 107 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 AL450471.1-201ENST00000447509 127 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 PRSS3P4-201ENST00000453323 162 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 RNU7-113P-201ENST00000459273 62 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 SEPT14P17-201ENST00000617978 177 ntBASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SCAF1Q9H7N4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 SNORA70.10-201ENST00000384515 134 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP317-201ENST00000410176 116 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RN7SKP177-201ENST00000410567 355 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP311-201ENST00000411290 116 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 AL162591.2-201ENST00000449634 317 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP315-201ENST00000516340 116 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNU7-153P-201ENST00000516455 62 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 RNA5SP312-201ENST00000517068 116 ntBASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAF1Q9H7N4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms