Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RPL23AP82-202ENST00000427528 469 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 AL161651.1-201ENST00000440882 223 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 AL358232.1-201ENST00000448030 501 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 RPL23AP7-203ENST00000449021 469 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 CENPBD1P1-201ENST00000464061 469 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-1337P-201ENST00000516525 95 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 SNORA51-201ENST00000606420 132 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 MIR7153-201ENST00000637758 57 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 AC068647.1-201ENST00000489539 2265 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 FAM35BP-202ENST00000497389 3337 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AL672296.1-201ENST00000427780 2158 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 SNORD114-7-201ENST00000362520 77 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-309P-201ENST00000364573 106 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-283P-201ENST00000364788 107 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 SNORD18B-201ENST00000365659 72 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-1080P-201ENST00000383982 107 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-1323P-201ENST00000384025 107 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 MIR30B-201ENST00000384850 88 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNA5SP496-201ENST00000391240 109 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 SNORA3.3-201ENST00000408712 125 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-554P-201ENST00000410466 106 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNY4P29-201ENST00000410801 97 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RPL39P40-201ENST00000445481 146 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-437P-201ENST00000459408 95 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RN7SL323P-201ENST00000494712 295 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AC145146.1-201ENST00000496370 254 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AL160236.1-201ENST00000556317 195 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 MIR5685-201ENST00000579080 79 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 POLR3GP1-201ENST00000594073 261 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AL021707.8-201ENST00000609428 183 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AC025166.1-201ENST00000612411 163 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AC112200.1-201ENST00000625015 234 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 MIR3199-2-201ENST00000636243 86 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-640P-201ENST00000363693 105 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-294P-201ENST00000364999 102 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 Y_RNA.348-201ENST00000365403 103 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 Y_RNA.388-201ENST00000383919 113 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 SNORA1.3-201ENST00000384676 136 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 SNORA48.8-201ENST00000391324 134 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 SNORA57.3-201ENST00000411095 141 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RNU2-55P-201ENST00000411146 174 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 CYCSP19-201ENST00000411715 316 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AL445584.1-201ENST00000431451 330 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RPS29P31-201ENST00000446147 164 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 snoU13.14-201ENST00000459372 104 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RPL23AP54-201ENST00000495129 419 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 MIR4738-201ENST00000579134 87 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AL138880.2-201ENST00000616214 239 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC004944.1-201ENST00000517807 3059 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC007656.2-201ENST00000624902 4547 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 SNORA26.2-201ENST00000390922 122 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 MIR873-201ENST00000401120 77 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC126124.2-201ENST00000413542 321 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC107626.1-201ENST00000471084 183 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC005921.1-201ENST00000510589 286 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 SCARNA14-201ENST00000516903 136 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC022695.1-201ENST00000522089 237 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC006130.2-201ENST00000586202 326 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 RPS15AP11-201ENST00000594193 385 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AL137843.1-201ENST00000605078 385 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 RNVU1-4-201ENST00000612985 164 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 MTND5P18-201ENST00000445624 1801 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 RNU4-41P-201ENST00000364426 143 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AL355796.1-201ENST00000406706 323 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 RPL21P10-201ENST00000463521 490 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-1299P-201ENST00000516316 100 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms