Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RPL23AP82-202ENST00000427528 469 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 AL161651.1-201ENST00000440882 223 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 AL358232.1-201ENST00000448030 501 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 RPL23AP7-203ENST00000449021 469 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 CENPBD1P1-201ENST00000464061 469 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-1337P-201ENST00000516525 95 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 SNORA51-201ENST00000606420 132 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 MIR7153-201ENST00000637758 57 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 AC068647.1-201ENST00000489539 2265 ntBASIC4.04□□□□□ -1.76
NUCKS1Q9H1E3 FAM35BP-202ENST00000497389 3337 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AL672296.1-201ENST00000427780 2158 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 SNORD114-7-201ENST00000362520 77 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-309P-201ENST00000364573 106 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-283P-201ENST00000364788 107 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 SNORD18B-201ENST00000365659 72 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-1080P-201ENST00000383982 107 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-1323P-201ENST00000384025 107 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 MIR30B-201ENST00000384850 88 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNA5SP496-201ENST00000391240 109 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 SNORA3.3-201ENST00000408712 125 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-554P-201ENST00000410466 106 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNY4P29-201ENST00000410801 97 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RPL39P40-201ENST00000445481 146 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RNU6-437P-201ENST00000459408 95 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 RN7SL323P-201ENST00000494712 295 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AC145146.1-201ENST00000496370 254 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AL160236.1-201ENST00000556317 195 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 MIR5685-201ENST00000579080 79 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 POLR3GP1-201ENST00000594073 261 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AL021707.8-201ENST00000609428 183 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AC025166.1-201ENST00000612411 163 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 AC112200.1-201ENST00000625015 234 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 MIR3199-2-201ENST00000636243 86 ntBASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NUCKS1Q9H1E3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-640P-201ENST00000363693 105 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-294P-201ENST00000364999 102 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 Y_RNA.348-201ENST00000365403 103 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 Y_RNA.388-201ENST00000383919 113 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 SNORA1.3-201ENST00000384676 136 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 SNORA48.8-201ENST00000391324 134 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 SNORA57.3-201ENST00000411095 141 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RNU2-55P-201ENST00000411146 174 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 CYCSP19-201ENST00000411715 316 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AL445584.1-201ENST00000431451 330 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RPS29P31-201ENST00000446147 164 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 snoU13.14-201ENST00000459372 104 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 RPL23AP54-201ENST00000495129 419 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 MIR4738-201ENST00000579134 87 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AL138880.2-201ENST00000616214 239 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC004944.1-201ENST00000517807 3059 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 AC007656.2-201ENST00000624902 4547 ntBASIC4.02□□□□□ -1.77
NUCKS1Q9H1E3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 SNORA26.2-201ENST00000390922 122 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 MIR873-201ENST00000401120 77 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC126124.2-201ENST00000413542 321 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC107626.1-201ENST00000471084 183 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC005921.1-201ENST00000510589 286 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 SCARNA14-201ENST00000516903 136 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC022695.1-201ENST00000522089 237 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AC006130.2-201ENST00000586202 326 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 RPS15AP11-201ENST00000594193 385 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 AL137843.1-201ENST00000605078 385 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 RNVU1-4-201ENST00000612985 164 ntBASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NUCKS1Q9H1E3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 MTND5P18-201ENST00000445624 1801 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 RNU4-41P-201ENST00000364426 143 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AL355796.1-201ENST00000406706 323 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 RPL21P10-201ENST00000463521 490 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-1299P-201ENST00000516316 100 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms