Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 MIR4672-201ENST00000583126 81 ntBASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 AC008749.1-201ENST00000597650 306 ntBASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 AC010900.2-201ENST00000604508 210 ntBASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 AC090115.4-201ENST00000609970 188 ntBASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 MIR7515-201ENST00000637837 67 ntBASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.72□□□□□ -1.97
AMBRA1Q9C0C7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 MIR449A-201ENST00000362113 91 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 RNA5SP432-201ENST00000362480 116 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 MIR29B2-201ENST00000385055 81 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 SNORA53-201ENST00000391141 249 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 AL603910.2-201ENST00000407268 136 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 RNA5SP475-201ENST00000410568 110 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 RN7SKP220-201ENST00000410611 288 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 RPS29P12-201ENST00000460178 152 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 AC140059.1-201ENST00000489238 361 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 SERF1AP1-201ENST00000514575 187 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 RNU6-344P-201ENST00000516635 111 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 RPL17P51-201ENST00000605218 238 ntBASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.71□□□□□ -1.98
AMBRA1Q9C0C7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 SNORD27-201ENST00000363981 72 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 SNORA72.2-201ENST00000365028 127 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 RNU6-326P-201ENST00000365480 107 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.515-201ENST00000384535 112 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.569-201ENST00000384749 103 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 SNORA12-201ENST00000391162 147 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 RAB28P5-201ENST00000427490 651 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC022018.1-201ENST00000430685 241 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 HMGB3P17-201ENST00000504195 649 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC008885.1-201ENST00000514930 301 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 RNU6-111P-201ENST00000517179 105 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 SNORA31.26-201ENST00000517250 137 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 DEFB131C-201ENST00000528817 165 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC022441.3-201ENST00000605737 136 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC004467.1-201ENST00000615678 330 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC006001.4-201ENST00000622243 395 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 AC127459.3-201ENST00000624328 466 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.7□□□□□ -1.98
AMBRA1Q9C0C7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.54-201ENST00000362766 105 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 SNORD32B-201ENST00000364460 84 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 SNORA68.1-201ENST00000364537 132 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.331-201ENST00000365267 102 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 U8.9-201ENST00000365667 134 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 SNORA44-201ENST00000384584 132 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 MIR887-201ENST00000401258 79 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AC004866.1-201ENST00000411748 78 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AC009237.7-201ENST00000447357 229 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 SEM1P1-201ENST00000506694 209 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 RNU2-31P-201ENST00000516954 155 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 SCARNA3-201ENST00000517097 143 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AC107016.2-201ENST00000547968 190 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AC055872.1-201ENST00000570978 278 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 BX284668.6-201ENST00000606899 438 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 SNORD11B-201ENST00000607707 90 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AC090517.3-201ENST00000625170 141 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AC135776.4-201ENST00000624300 1904 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
AMBRA1Q9C0C7 AC010329.5-201ENST00000623497 2174 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.277-201ENST00000364754 102 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 RNU6-338P-201ENST00000383888 105 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.539-201ENST00000384635 107 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms