Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC008885.1-201ENST00000514930 301 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC074133.1-201ENST00000515696 183 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 RNA5SP54-201ENST00000516951 92 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AL033523.1-201ENST00000605153 153 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC005828.6-201ENST00000606610 232 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 uc_338.1-201ENST00000612113 180 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
ZNF48Q96MX3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
ZNF48Q96MX3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.59□□□□□ -2
ZNF48Q96MX3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.59□□□□□ -2
ZNF48Q96MX3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.59□□□□□ -2
ZNF48Q96MX3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
ZNF48Q96MX3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZNF48Q96MX3 ZNF204P-201ENST00000416749 2397 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 AC110491.1-201ENST00000562191 2010 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 RNU6-653P-201ENST00000363074 106 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 RNU4-80P-201ENST00000363200 141 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 RNA5SP229-201ENST00000410809 99 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.58□□□□□ -2
ZNF48Q96MX3 AC103975.1-201ENST00000482506 483 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.58□□□□□ -2
ZNF48Q96MX3 RNU6-191P-201ENST00000516295 94 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 AC009163.5-201ENST00000575421 637 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 MIR5692C2-201ENST00000577959 77 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.58□□□□□ -2
ZNF48Q96MX3 UBL5P2-201ENST00000583788 219 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 MIR7515-201ENST00000637837 67 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZNF48Q96MX3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
ZNF48Q96MX3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
ZNF48Q96MX3 AC009487.2-201ENST00000420969 6821 ntBASIC2.58□□□□□ -2
ZNF48Q96MX3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.58□□□□□ -2
ZNF48Q96MX3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.57□□□□□ -2
ZNF48Q96MX3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZNF48Q96MX3 AL161431.1-201ENST00000618966 4205 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.57□□□□□ -2
ZNF48Q96MX3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.57□□□□□ -2
ZNF48Q96MX3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 SNORD56.3-201ENST00000363507 71 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 RNU6-211P-201ENST00000384047 107 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 AC012306.1-201ENST00000423267 114 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 AC024067.1-201ENST00000426199 223 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 AC092427.1-202ENST00000430569 476 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.57□□□□□ -2
ZNF48Q96MX3 AC025750.2-201ENST00000442609 450 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 HMGN2P10-201ENST00000448085 265 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 RNU6-625P-201ENST00000459412 107 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 RNA5SP217-201ENST00000515959 91 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 RNU6-581P-201ENST00000516214 105 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 AC245166.1-201ENST00000521012 253 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.57□□□□□ -2
ZNF48Q96MX3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ZNF48Q96MX3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ZNF48Q96MX3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
ZNF48Q96MX3 AL365361.1-201ENST00000566942 3481 ntBASIC2.57□□□□□ -2
ZNF48Q96MX3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ZNF48Q96MX3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.57□□□□□ -2
ZNF48Q96MX3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZNF48Q96MX3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.57□□□□□ -2
ZNF48Q96MX3 MTND5P35-201ENST00000557537 1720 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 ADAM3A-203ENST00000461344 2157 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZNF48Q96MX3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF48Q96MX3 RNU4-56P-201ENST00000364700 142 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 SNORA72.2-201ENST00000365028 127 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 SNORA7.4-201ENST00000384249 137 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 RNU6-622P-201ENST00000384272 103 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 AL357139.1-201ENST00000407792 426 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 RPL32P35-201ENST00000415214 394 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 BPY2DP-201ENST00000422208 265 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 RAB28P5-201ENST00000427490 651 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
ZNF48Q96MX3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.56□□□□□ -2
ZNF48Q96MX3 RPL39P29-201ENST00000447779 157 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 UBE2DNL-203ENST00000474922 222 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.56□□□□□ -2
ZNF48Q96MX3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 CYCSP23-201ENST00000519781 313 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 AC018448.1-201ENST00000552843 316 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 MIR3145-201ENST00000580727 82 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 AC090897.2-201ENST00000581715 130 ntBASIC2.56□□□□□ -2
ZNF48Q96MX3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.56□□□□□ -2
ZNF48Q96MX3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms