Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RNU6-1199P-201ENST00000411249 104 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 AC004866.1-201ENST00000411748 78 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 RPS12P18-201ENST00000442381 270 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 RN7SL330P-201ENST00000469709 307 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 SRIP1-201ENST00000489235 288 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 RNU1-117P-201ENST00000517041 158 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 AP005660.1-201ENST00000522972 293 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 DEFB131C-201ENST00000528817 165 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 AP003122.5-201ENST00000527668 3766 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 SNORA5B-201ENST00000363786 132 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AL139132.1-201ENST00000431587 344 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 MICF-203ENST00000432679 129 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AC104332.1-201ENST00000440471 797 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 SNORD2.1-201ENST00000458762 69 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 RNU7-120P-201ENST00000459334 63 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 RNU2-12P-201ENST00000517216 168 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AC024405.2-202ENST00000532731 184 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AP002001.1-203ENST00000534002 267 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AP002392.1-201ENST00000537692 208 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AC008873.1-201ENST00000625051 138 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AC090517.3-201ENST00000625170 141 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 MIR7157-201ENST00000635801 60 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 AC010329.5-201ENST00000623497 2174 ntBASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SH3RF2Q8TEC5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 AC073325.2-201ENST00000339545 159 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 RNU4-80P-201ENST00000363200 141 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 Y_RNA.217-201ENST00000364214 105 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 SNORD87-201ENST00000364849 89 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 CD24P4-201ENST00000382840 243 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 SNORA40.19-201ENST00000390846 128 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 SNORA12-201ENST00000391162 147 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 MIR1294-201ENST00000408503 142 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 Y_RNA.641-201ENST00000459414 105 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 UBE2DNL-203ENST00000474922 222 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 SEM1P1-201ENST00000506694 209 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-191P-201ENST00000516295 94 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 MIR3684-201ENST00000579779 74 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 AL035425.3-201ENST00000564206 4996 ntBASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.11□□□□□ -1.91
SH3RF2Q8TEC5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-1020P-201ENST00000363684 107 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-324P-201ENST00000363957 106 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 SNORA67.2-201ENST00000384300 149 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 Y_RNA.500-201ENST00000384466 111 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 MIR586-201ENST00000385035 97 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 MIR1289-1-201ENST00000408836 144 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 Y_RNA.597-201ENST00000410463 100 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 RNA5SP504-201ENST00000410676 117 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 SUMO1P3-201ENST00000439961 304 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 SUMO1P2-201ENST00000452524 304 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AC083906.5-201ENST00000503722 328 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 RAC1P5-201ENST00000512182 576 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 SNORD116-28-201ENST00000516123 91 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AC093331.1-201ENST00000521474 169 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 MIR4513-201ENST00000581077 86 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AL365434.2-201ENST00000607979 234 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 AC103988.1-201ENST00000566382 2177 ntBASIC3.1□□□□□ -1.91
SH3RF2Q8TEC5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SH3RF2Q8TEC5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-662P-201ENST00000384253 104 ntBASIC3.09□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-886P-201ENST00000384319 105 ntBASIC3.09□□□□□ -1.91
SH3RF2Q8TEC5 U3.40-201ENST00000408706 208 ntBASIC3.09□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-710P-201ENST00000410424 105 ntBASIC3.09□□□□□ -1.91
SH3RF2Q8TEC5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms