Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AL392103.1-201ENST00000447000 198 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 SCARNA13-201ENST00000516672 275 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 RNU2-44P-201ENST00000516795 194 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.75□□□□□ -1.97
KRT78Q8N1N4 AC090617.3-201ENST00000573670 475 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 AL390123.1-201ENST00000603216 237 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 AC004792.1-201ENST00000614523 137 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 AC005296.1-201ENST00000616145 209 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 AP001282.2-201ENST00000616149 309 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.75□□□□□ -1.97
KRT78Q8N1N4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
KRT78Q8N1N4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
KRT78Q8N1N4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.65-201ENST00000362846 100 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 RNU6-234P-201ENST00000365229 104 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 RNU6-245P-201ENST00000384020 107 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 RNU6-187P-201ENST00000384139 106 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 RNU6-159P-201ENST00000391080 106 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 RNU7-14P-201ENST00000459331 62 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT78Q8N1N4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.74□□□□□ -1.97
KRT78Q8N1N4 AC022868.1-201ENST00000517767 391 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 UBL5P4-201ENST00000562584 236 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 MIR3910-1-201ENST00000580936 111 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT78Q8N1N4 AC093732.2-201ENST00000607950 274 ntBASIC2.74□□□□□ -1.97
KRT78Q8N1N4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
KRT78Q8N1N4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
KRT78Q8N1N4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.73□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.29-201ENST00000362570 113 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.84-201ENST00000363011 104 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 RNU6-873P-201ENST00000363833 107 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 RNU6-879P-201ENST00000364328 108 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.237-201ENST00000364439 102 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.270-201ENST00000364693 104 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.297-201ENST00000364950 91 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 SNORA70.4-201ENST00000365509 134 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 RNU6-438P-201ENST00000365561 103 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 SNORA48.5-201ENST00000391143 135 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 MIR548H3-201ENST00000408771 118 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 HMGN2P35-201ENST00000412164 270 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 RPEP5-201ENST00000441137 268 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 RPS27AP9-201ENST00000477681 438 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 SNORA4.4-201ENST00000515921 135 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 SNORA9.3-201ENST00000516383 129 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 RNA5SP490-201ENST00000517141 136 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.73□□□□□ -1.97
KRT78Q8N1N4 MIR3126-201ENST00000577443 74 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.73□□□□□ -1.97
KRT78Q8N1N4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.73□□□□□ -1.97
KRT78Q8N1N4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.73□□□□□ -1.97
KRT78Q8N1N4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
KRT78Q8N1N4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
KRT78Q8N1N4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
KRT78Q8N1N4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRT78Q8N1N4 MIR26A1-201ENST00000362205 77 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.54-201ENST00000362766 105 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 RNA5SP387-201ENST00000364226 106 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 SNORA18.3-201ENST00000384122 132 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 RNU6-611P-201ENST00000384276 104 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 RNU1-139P-201ENST00000391307 165 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 RNU6-1203P-201ENST00000410703 110 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 SDAD1P3-201ENST00000427380 333 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.72□□□□□ -1.97
KRT78Q8N1N4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 S100A11P2-201ENST00000467589 312 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.72□□□□□ -1.97
KRT78Q8N1N4 RNU6-1098P-201ENST00000516772 96 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 Y_RNA.700-201ENST00000516806 100 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 AC034114.1-201ENST00000520293 285 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 MIR3605-201ENST00000583214 100 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
KRT78Q8N1N4 AL391987.6-201ENST00000305671 199 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.277-201ENST00000364754 102 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 RNU6-746P-201ENST00000384112 109 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 RNU6-886P-201ENST00000384319 105 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 MIR181A2-201ENST00000384863 110 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 MIR491-201ENST00000384877 84 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 AL603910.2-201ENST00000407268 136 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.71□□□□□ -1.98
KRT78Q8N1N4 AC104332.1-201ENST00000440471 797 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.71□□□□□ -1.98
KRT78Q8N1N4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.71□□□□□ -1.98
KRT78Q8N1N4 MIR2355-201ENST00000517199 87 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 DEFB108E-201ENST00000524692 240 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.71□□□□□ -1.98
KRT78Q8N1N4 AC026271.5-201ENST00000577873 130 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 MIR3133-201ENST00000583157 78 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 ZNF861P-201ENST00000588126 639 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 MIR1248-201ENST00000629190 106 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 AC243829.7-201ENST00000633081 225 ntBASIC2.71□□□□□ -1.98
KRT78Q8N1N4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms