Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RNU6-1274P-201ENST00000384557 107 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 SNORA36B-201ENST00000410438 131 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 HMGN2P7-201ENST00000456186 273 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 AC114982.1-201ENST00000469402 321 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 MRPS36P2-201ENST00000512569 299 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 RNU7-115P-201ENST00000516433 55 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 MIR3200-201ENST00000580767 85 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM50Q86XT4 U4.6-201ENST00000621618 127 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 AC091953.5-201ENST00000622919 233 ntBASIC4.02□□□□□ -1.77
TRIM50Q86XT4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
TRIM50Q86XT4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 RNU6-944P-201ENST00000364023 107 ntBASIC4.01□□□□□ -1.77
TRIM50Q86XT4 RNU6-1083P-201ENST00000384022 107 ntBASIC4.01□□□□□ -1.77
TRIM50Q86XT4 AC112693.2-201ENST00000556538 232 ntBASIC4.01□□□□□ -1.77
TRIM50Q86XT4 UCA1.1-201ENST00000620952 75 ntBASIC4.01□□□□□ -1.77
TRIM50Q86XT4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 snoZ196.1-201ENST00000625269 89 ntBASIC4.01□□□□□ -1.77
TRIM50Q86XT4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM50Q86XT4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM50Q86XT4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4□□□□□ -1.77
TRIM50Q86XT4 AL049781.1-201ENST00000623195 3585 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4□□□□□ -1.77
TRIM50Q86XT4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM50Q86XT4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4□□□□□ -1.77
TRIM50Q86XT4 RNU4-35P-201ENST00000362588 141 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 Y_RNA.81-201ENST00000362997 102 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 RNU6-486P-201ENST00000363116 107 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 RNA5SP50-201ENST00000363731 107 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 Y_RNA.261-201ENST00000364631 102 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 SNORA14A-201ENST00000364773 135 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 RNU6-234P-201ENST00000365229 104 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 RNU6-728P-201ENST00000365375 104 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 SNORD6-201ENST00000365444 73 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 RNU6-1228P-201ENST00000391014 107 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 RNU6-57P-201ENST00000411348 103 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 AC016717.1-201ENST00000448918 286 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 U7.8-201ENST00000619968 63 ntBASIC4□□□□□ -1.77
TRIM50Q86XT4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
TRIM50Q86XT4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM50Q86XT4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM50Q86XT4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM50Q86XT4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM50Q86XT4 SNORD114-7-201ENST00000362520 77 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 SNORA27.1-201ENST00000362604 124 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 Y_RNA.420-201ENST00000384043 110 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 SNORD65B-201ENST00000459126 73 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 RNU6-1211P-201ENST00000459179 105 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 AC093663.1-201ENST00000497190 394 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 AC083906.5-201ENST00000503722 328 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 ATP5EP1-201ENST00000510257 156 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM50Q86XT4 AC023043.3-201ENST00000593113 385 ntBASIC3.99□□□□□ -1.77
TRIM50Q86XT4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM50Q86XT4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM50Q86XT4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 AL356292.1-201ENST00000283110 373 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 RNU6-271P-201ENST00000363858 105 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 MIR491-201ENST00000384877 84 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 HSPE1P13-201ENST00000451143 297 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 BX510359.1-201ENST00000456973 237 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 RPS26P55-201ENST00000471178 356 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 AC109329.2-201ENST00000519658 482 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 MIR4474-201ENST00000579189 78 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 AC110079.1-202ENST00000635213 138 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 ZNF702P-202ENST00000434269 1966 ntBASIC3.98□□□□□ -1.77
TRIM50Q86XT4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM50Q86XT4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM50Q86XT4 RNU1-33P-201ENST00000364249 162 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 RNA5SP267-201ENST00000364893 126 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 RNU6-975P-201ENST00000384296 105 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 Y_RNA.521-201ENST00000384560 114 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 Y_RNA.542-201ENST00000384641 111 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM50Q86XT4 AC010598.1-201ENST00000510378 103 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 SNORA70.24-201ENST00000517233 118 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM50Q86XT4 LARP7P3-201ENST00000579888 337 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 POLR3GP1-201ENST00000594073 261 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 AP003357.1-201ENST00000604497 148 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 AC012531.5-201ENST00000611375 151 ntBASIC3.97□□□□□ -1.77
TRIM50Q86XT4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM50Q86XT4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms