Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 snoU2_19.1-201ENST00000362361 80 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 Y_RNA.346-201ENST00000365385 112 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 SNORD116-13-201ENST00000384408 92 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 RNU1-57P-201ENST00000384491 166 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 MIR1278-201ENST00000408753 81 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 RNU2-49P-201ENST00000410666 184 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 RNU2-37P-201ENST00000410695 177 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 RN7SKP101-201ENST00000411376 320 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 RNU6-781P-201ENST00000516377 101 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 RPL30P11-203ENST00000598995 310 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 AC015726.2-201ENST00000620112 122 ntBASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SH3RF1Q7Z6J0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 RNU6-766P-201ENST00000362478 107 ntBASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 RNU6-978P-201ENST00000364371 103 ntBASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 SNORA12-201ENST00000391162 147 ntBASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 AC090515.1-201ENST00000465295 476 ntBASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 RN7SKP19-201ENST00000516016 252 ntBASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 RNA5SP208-201ENST00000516156 78 ntBASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 RNU5F-4P-201ENST00000516581 114 ntBASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 AL160236.1-201ENST00000556317 195 ntBASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SH3RF1Q7Z6J0 AC010889.1-201ENST00000566193 2666 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 RNU6-674P-201ENST00000363831 107 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 Y_RNA.281-201ENST00000364774 94 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 SNORA51.4-201ENST00000364993 124 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 HSPE1P26-201ENST00000405341 275 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 AL135786.1-201ENST00000415892 214 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 AC023449.1-201ENST00000454464 154 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 AP002884.2-201ENST00000471647 395 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 AL049873.1-201ENST00000480540 376 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 RN7SKP18-201ENST00000516005 275 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 RNU1-61P-201ENST00000516107 151 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 AC018630.3-201ENST00000542637 96 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF1Q7Z6J0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SH3RF1Q7Z6J0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 Y_RNA.328-201ENST00000365208 113 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 AL355796.1-201ENST00000406706 323 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 RPL39P40-201ENST00000445481 146 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 AP001486.1-201ENST00000463339 476 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 AC112771.1-201ENST00000463581 102 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 RPS26P55-201ENST00000471178 356 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 HMGN2P9-201ENST00000476875 229 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 RNU6-412P-201ENST00000516434 106 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 Y_RNA.690-201ENST00000516603 95 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 RNA5SP309-201ENST00000516670 106 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 AC022695.1-201ENST00000522089 237 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 MIR5187-201ENST00000583479 76 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 AL049861.1-201ENST00000603130 150 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 SNORA62.6-201ENST00000606322 83 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 AC244205.2-202ENST00000635781 342 ntBASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF1Q7Z6J0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 MFSD8-236ENST00000641509 4050 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 SNORA27.1-201ENST00000362604 124 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 MIR128-1-201ENST00000384921 82 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 AL603914.1-201ENST00000401964 204 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 RNU2-70P-201ENST00000410718 179 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 HSPE1P7-201ENST00000604681 321 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 MIR6076-201ENST00000617521 113 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 AF117829.1-206ENST00000621883 3802 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.26□□□□□ -1.73
SH3RF1Q7Z6J0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 RNU4-13P-201ENST00000364019 141 ntBASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 RNU6-484P-201ENST00000384016 107 ntBASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 AL353705.1-201ENST00000433468 480 ntBASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 HMGN2P32-201ENST00000444648 269 ntBASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 RPL30P14-201ENST00000482744 348 ntBASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 RN7SKP209-201ENST00000516888 304 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms