Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCNFP41002 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCNFP41002 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.37□□□□□ -1.87
CCNFP41002 AL157777.2-201ENST00000258070 137 ntBASIC3.37□□□□□ -1.87
CCNFP41002 RNU6-653P-201ENST00000363074 106 ntBASIC3.37□□□□□ -1.87
CCNFP41002 Y_RNA.240-201ENST00000364469 95 ntBASIC3.37□□□□□ -1.87
CCNFP41002 RNU6-804P-201ENST00000384286 107 ntBASIC3.37□□□□□ -1.87
CCNFP41002 MTCO2P33-201ENST00000402100 465 ntBASIC3.37□□□□□ -1.87
CCNFP41002 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNFP41002 MIR1294-201ENST00000408503 142 ntBASIC3.37□□□□□ -1.87
CCNFP41002 RNU6-855P-201ENST00000410395 104 ntBASIC3.37□□□□□ -1.87
CCNFP41002 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNFP41002 AL139281.1-201ENST00000422120 335 ntBASIC3.37□□□□□ -1.87
CCNFP41002 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNFP41002 RN7SL601P-201ENST00000471221 293 ntBASIC3.37□□□□□ -1.87
CCNFP41002 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.37□□□□□ -1.87
CCNFP41002 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
CCNFP41002 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNFP41002 RPL17P51-201ENST00000605218 238 ntBASIC3.37□□□□□ -1.87
CCNFP41002 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNFP41002 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCNFP41002 AC134026.1-201ENST00000623249 2239 ntBASIC3.37□□□□□ -1.87
CCNFP41002 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNFP41002 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCNFP41002 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCNFP41002 RNU6-1048P-201ENST00000364054 107 ntBASIC3.36□□□□□ -1.87
CCNFP41002 Y_RNA.293-201ENST00000364908 93 ntBASIC3.36□□□□□ -1.87
CCNFP41002 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
CCNFP41002 SNORD21-201ENST00000383953 95 ntBASIC3.36□□□□□ -1.87
CCNFP41002 MIR1289-1-201ENST00000408836 144 ntBASIC3.36□□□□□ -1.87
CCNFP41002 RNU2-2P-201ENST00000410396 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNFP41002 FCF1P8-201ENST00000510322 597 ntBASIC3.36□□□□□ -1.87
CCNFP41002 RNU6-406P-201ENST00000516470 107 ntBASIC3.36□□□□□ -1.87
CCNFP41002 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.36□□□□□ -1.87
CCNFP41002 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNFP41002 MIR5692C2-201ENST00000577959 77 ntBASIC3.36□□□□□ -1.87
CCNFP41002 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNFP41002 RNU2-4P-201ENST00000606190 192 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.15-201ENST00000611544 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.16-201ENST00000613119 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.12-201ENST00000613778 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.9-201ENST00000615427 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.11-201ENST00000616345 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.2-201ENST00000616535 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.3-201ENST00000617785 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.19-201ENST00000618602 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 RNU2-1-201ENST00000618664 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.6-201ENST00000619225 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.5-201ENST00000619465 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U2.10-201ENST00000620268 191 ntBASIC3.36□□□□□ -1.87
CCNFP41002 AC008873.1-201ENST00000625051 138 ntBASIC3.36□□□□□ -1.87
CCNFP41002 U6.115-201ENST00000636045 103 ntBASIC3.36□□□□□ -1.87
CCNFP41002 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNFP41002 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.36□□□□□ -1.87
CCNFP41002 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNFP41002 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNFP41002 Y_RNA.170-201ENST00000363746 110 ntBASIC3.35□□□□□ -1.87
CCNFP41002 RNU6-944P-201ENST00000364023 107 ntBASIC3.35□□□□□ -1.87
CCNFP41002 RNU6-801P-201ENST00000364087 105 ntBASIC3.35□□□□□ -1.87
CCNFP41002 Y_RNA.243-201ENST00000364481 109 ntBASIC3.35□□□□□ -1.87
CCNFP41002 RNU6-1274P-201ENST00000384557 107 ntBASIC3.35□□□□□ -1.87
CCNFP41002 Y_RNA.571-201ENST00000384753 98 ntBASIC3.35□□□□□ -1.87
CCNFP41002 MIR586-201ENST00000385035 97 ntBASIC3.35□□□□□ -1.87
CCNFP41002 U6atac.2-201ENST00000408644 118 ntBASIC3.35□□□□□ -1.87
CCNFP41002 RNU6-710P-201ENST00000410424 105 ntBASIC3.35□□□□□ -1.87
CCNFP41002 RNU6-1328P-201ENST00000410938 106 ntBASIC3.35□□□□□ -1.87
CCNFP41002 AL392103.1-201ENST00000447000 198 ntBASIC3.35□□□□□ -1.87
CCNFP41002 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.35□□□□□ -1.87
CCNFP41002 SCARNA3-201ENST00000517097 143 ntBASIC3.35□□□□□ -1.87
CCNFP41002 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.35□□□□□ -1.87
CCNFP41002 AL161756.2-201ENST00000604597 246 ntBASIC3.35□□□□□ -1.87
CCNFP41002 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
CCNFP41002 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCNFP41002 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNFP41002 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCNFP41002 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNFP41002 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNFP41002 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
CCNFP41002 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCNFP41002 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCNFP41002 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCNFP41002 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CCNFP41002 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCNFP41002 Y_RNA.287-201ENST00000364853 94 ntBASIC3.34□□□□□ -1.87
CCNFP41002 Y_RNA.341-201ENST00000365341 102 ntBASIC3.34□□□□□ -1.87
CCNFP41002 RNU4-17P-201ENST00000365598 141 ntBASIC3.34□□□□□ -1.87
CCNFP41002 SNORD14D-201ENST00000384390 87 ntBASIC3.34□□□□□ -1.87
CCNFP41002 SNORA26.5-201ENST00000391215 123 ntBASIC3.34□□□□□ -1.87
CCNFP41002 AL135790.2-201ENST00000437701 267 ntBASIC3.34□□□□□ -1.87
CCNFP41002 RPS20P10-201ENST00000451209 253 ntBASIC3.34□□□□□ -1.87
CCNFP41002 HMGN2P9-201ENST00000476875 229 ntBASIC3.34□□□□□ -1.87
CCNFP41002 RNU6-346P-201ENST00000516288 111 ntBASIC3.34□□□□□ -1.87
CCNFP41002 AC136628.3-201ENST00000521868 290 ntBASIC3.34□□□□□ -1.87
CCNFP41002 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNFP41002 MIR3199-1-201ENST00000582434 88 ntBASIC3.34□□□□□ -1.87
CCNFP41002 MIR4753-201ENST00000585119 83 ntBASIC3.34□□□□□ -1.87
CCNFP41002 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCNFP41002 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.34□□□□□ -1.87
CCNFP41002 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms