Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
H3BM21 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
H3BM21 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
H3BM21 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
H3BM21 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
H3BM21 MAPK10-253ENST00000641010 4072 ntBASIC4.04□□□□□ -1.76
H3BM21 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.04□□□□□ -1.76
H3BM21 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.04□□□□□ -1.76
H3BM21 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.04□□□□□ -1.76
H3BM21 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
H3BM21 SNORA27.1-201ENST00000362604 124 ntBASIC4.04□□□□□ -1.76
H3BM21 RNU6-1138P-201ENST00000365359 106 ntBASIC4.04□□□□□ -1.76
H3BM21 RNA5SP39-201ENST00000411245 120 ntBASIC4.04□□□□□ -1.76
H3BM21 AC092047.1-201ENST00000424997 240 ntBASIC4.04□□□□□ -1.76
H3BM21 AL353705.1-201ENST00000433468 480 ntBASIC4.04□□□□□ -1.76
H3BM21 RN7SKP209-201ENST00000516888 304 ntBASIC4.04□□□□□ -1.76
H3BM21 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.04□□□□□ -1.76
H3BM21 RN7SL703P-201ENST00000578485 302 ntBASIC4.04□□□□□ -1.76
H3BM21 MIR2681-201ENST00000581814 105 ntBASIC4.04□□□□□ -1.76
H3BM21 MIR7151-201ENST00000617477 60 ntBASIC4.04□□□□□ -1.76
H3BM21 U4atac.1-201ENST00000618345 95 ntBASIC4.04□□□□□ -1.76
H3BM21 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.04□□□□□ -1.76
H3BM21 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3BM21 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3BM21 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
H3BM21 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
H3BM21 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
H3BM21 RNU6-486P-201ENST00000363116 107 ntBASIC4.03□□□□□ -1.76
H3BM21 MIR1183-201ENST00000408856 89 ntBASIC4.03□□□□□ -1.76
H3BM21 OR9P1P-201ENST00000496431 281 ntBASIC4.03□□□□□ -1.76
H3BM21 AC093663.1-201ENST00000497190 394 ntBASIC4.03□□□□□ -1.76
H3BM21 RNU6-581P-201ENST00000516214 105 ntBASIC4.03□□□□□ -1.76
H3BM21 SNORA70.16-201ENST00000516390 95 ntBASIC4.03□□□□□ -1.76
H3BM21 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.03□□□□□ -1.76
H3BM21 SNORA67.7-201ENST00000516664 135 ntBASIC4.03□□□□□ -1.76
H3BM21 RNU6-63P-201ENST00000516690 95 ntBASIC4.03□□□□□ -1.76
H3BM21 MIR5684-201ENST00000585074 65 ntBASIC4.03□□□□□ -1.76
H3BM21 AC110741.2-201ENST00000605278 268 ntBASIC4.03□□□□□ -1.76
H3BM21 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.03□□□□□ -1.76
H3BM21 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.03□□□□□ -1.76
H3BM21 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.03□□□□□ -1.76
H3BM21 ZNF962P-201ENST00000443465 3140 ntBASIC4.03□□□□□ -1.76
H3BM21 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
H3BM21 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.02□□□□□ -1.77
H3BM21 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
H3BM21 RNU6-600P-201ENST00000362524 99 ntBASIC4.02□□□□□ -1.77
H3BM21 RNU1-72P-201ENST00000362976 153 ntBASIC4.02□□□□□ -1.77
H3BM21 RNU6-271P-201ENST00000363858 105 ntBASIC4.02□□□□□ -1.77
H3BM21 Y_RNA.203-201ENST00000364106 102 ntBASIC4.02□□□□□ -1.77
H3BM21 RNU6-219P-201ENST00000364728 107 ntBASIC4.02□□□□□ -1.77
H3BM21 RNU6-652P-201ENST00000365488 107 ntBASIC4.02□□□□□ -1.77
H3BM21 RNU6-816P-201ENST00000390914 107 ntBASIC4.02□□□□□ -1.77
H3BM21 RNU6-1268P-201ENST00000391214 107 ntBASIC4.02□□□□□ -1.77
H3BM21 RNU6-1239P-201ENST00000391310 107 ntBASIC4.02□□□□□ -1.77
H3BM21 MIR1185-2-201ENST00000408687 86 ntBASIC4.02□□□□□ -1.77
H3BM21 MIR1912-201ENST00000410389 80 ntBASIC4.02□□□□□ -1.77
H3BM21 AC004941.2-201ENST00000427009 228 ntBASIC4.02□□□□□ -1.77
H3BM21 AL591419.1-201ENST00000427423 339 ntBASIC4.02□□□□□ -1.77
H3BM21 AC018634.1-201ENST00000437554 401 ntBASIC4.02□□□□□ -1.77
H3BM21 AC080013.2-201ENST00000460866 323 ntBASIC4.02□□□□□ -1.77
H3BM21 RN7SL542P-201ENST00000467147 294 ntBASIC4.02□□□□□ -1.77
H3BM21 RPL27AP5-201ENST00000469428 449 ntBASIC4.02□□□□□ -1.77
H3BM21 AC096725.1-201ENST00000514266 313 ntBASIC4.02□□□□□ -1.77
H3BM21 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.02□□□□□ -1.77
H3BM21 SCARNA15-202ENST00000516881 127 ntBASIC4.02□□□□□ -1.77
H3BM21 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.02□□□□□ -1.77
H3BM21 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.02□□□□□ -1.77
H3BM21 MIR5685-201ENST00000579080 79 ntBASIC4.02□□□□□ -1.77
H3BM21 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H3BM21 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.02□□□□□ -1.77
H3BM21 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
H3BM21 AP001486.2-201ENST00000561652 5113 ntBASIC4.01□□□□□ -1.77
H3BM21 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.01□□□□□ -1.77
H3BM21 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.01□□□□□ -1.77
H3BM21 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3BM21 LINC02471-203ENST00000641941 4752 ntBASIC4.01□□□□□ -1.77
H3BM21 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
H3BM21 Y_RNA.10-201ENST00000362371 110 ntBASIC4.01□□□□□ -1.77
H3BM21 RNU6-1099P-201ENST00000363533 107 ntBASIC4.01□□□□□ -1.77
H3BM21 SNORD35B-201ENST00000363660 87 ntBASIC4.01□□□□□ -1.77
H3BM21 RNU4-13P-201ENST00000364019 141 ntBASIC4.01□□□□□ -1.77
H3BM21 MIR562-201ENST00000384894 95 ntBASIC4.01□□□□□ -1.77
H3BM21 MIR670-201ENST00000390142 98 ntBASIC4.01□□□□□ -1.77
H3BM21 RNU6-938P-201ENST00000411285 103 ntBASIC4.01□□□□□ -1.77
H3BM21 CYCSP48-201ENST00000417124 323 ntBASIC4.01□□□□□ -1.77
H3BM21 snoU13.24-201ENST00000458998 104 ntBASIC4.01□□□□□ -1.77
H3BM21 SNRPGP3-201ENST00000469405 227 ntBASIC4.01□□□□□ -1.77
H3BM21 RPS26P48-201ENST00000491713 339 ntBASIC4.01□□□□□ -1.77
H3BM21 HMGB1P22-201ENST00000505315 124 ntBASIC4.01□□□□□ -1.77
H3BM21 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.01□□□□□ -1.77
H3BM21 RNU6-795P-201ENST00000516323 103 ntBASIC4.01□□□□□ -1.77
H3BM21 RNU7-143P-201ENST00000516781 65 ntBASIC4.01□□□□□ -1.77
H3BM21 HSPE1P5-201ENST00000561489 272 ntBASIC4.01□□□□□ -1.77
H3BM21 AC025627.2-201ENST00000576220 160 ntBASIC4.01□□□□□ -1.77
H3BM21 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.01□□□□□ -1.77
H3BM21 MIR3158-1-201ENST00000583596 81 ntBASIC4.01□□□□□ -1.77
H3BM21 AC012468.1-201ENST00000604888 430 ntBASIC4.01□□□□□ -1.77
H3BM21 AC012531.4-201ENST00000616509 177 ntBASIC4.01□□□□□ -1.77
H3BM21 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
H3BM21 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms