Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL139132.1-201ENST00000431587 344 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 HMGN2P18-201ENST00000450680 270 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-1338P-201ENST00000516328 91 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 RNA5SP367-201ENST00000516557 118 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 AC023157.2-201ENST00000540596 141 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 GTF3AP2-201ENST00000557014 266 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 uc_338.25-201ENST00000613756 156 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-324P-201ENST00000363957 106 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-1264P-201ENST00000383891 107 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.476-201ENST00000384347 108 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-851P-201ENST00000384565 107 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 MIR561-201ENST00000385216 97 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 MIR1283-1-201ENST00000408494 87 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 AC009969.1-201ENST00000438726 172 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 HSPE1P25-201ENST00000455484 251 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 CENPBD1P1-201ENST00000464061 469 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 HMGB3P17-201ENST00000504195 649 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 RNA5SP490-201ENST00000517141 136 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 AP002001.1-203ENST00000534002 267 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 AC006380.1-201ENST00000603598 186 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 AC090425.1-201ENST00000610007 140 ntBASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC163A0A0D9SF12 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.14-201ENST00000362415 103 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.54-201ENST00000362766 105 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-290P-201ENST00000365212 101 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.350-201ENST00000365409 98 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.446-201ENST00000384178 104 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 SNORA67.2-201ENST00000384300 149 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 SNORD14D-201ENST00000384390 87 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 MIR300-201ENST00000401138 83 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 RPL39P38-201ENST00000467018 153 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-991P-201ENST00000516168 107 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 AC018630.3-201ENST00000542637 96 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 AC012433.1-201ENST00000588916 398 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 AC013412.1-201ENST00000610687 192 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 AP001282.2-201ENST00000616149 309 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 SDR42E1P4-201ENST00000620894 481 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 AC244205.2-202ENST00000635781 342 ntBASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC163A0A0D9SF12 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 Z82209.1-201ENST00000422141 2135 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 U3.8-201ENST00000363675 217 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.447-201ENST00000384184 113 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.569-201ENST00000384749 103 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 MIR586-201ENST00000385035 97 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 MIR95-201ENST00000385072 81 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 SNORA53-201ENST00000391141 249 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 AL357139.1-201ENST00000407792 426 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 RNA5SP184-201ENST00000411071 108 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 AC003685.2-201ENST00000422795 395 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 POLR2KP2-201ENST00000438155 177 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 AC074290.1-201ENST00000448883 135 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 AC016717.1-201ENST00000448918 286 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 AC005042.3-201ENST00000453230 174 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 RNU7-57P-201ENST00000459540 60 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 HMGN2P9-201ENST00000476875 229 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 SNORA48.11-201ENST00000517015 89 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 MIR4423-201ENST00000580922 80 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 MIR3128-201ENST00000581957 66 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 AC037487.3-201ENST00000606668 112 ntBASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC163A0A0D9SF12 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 MIR22-201ENST00000362190 85 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 SNORD81.1-201ENST00000363064 77 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms