Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 AL079342.1-201ENST00000401460 267 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 AL138827.1-201ENST00000402666 306 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 MIR1302-3-201ENST00000408128 138 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 RNU2-63P-201ENST00000410792 194 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 AL445687.1-201ENST00000439946 251 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 DYNLT3P2-201ENST00000442517 295 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 UBBP3-201ENST00000445497 241 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 IFNA11P-201ENST00000446352 526 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 RPS23P5-201ENST00000495419 428 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 AC025465.3-201ENST00000510570 311 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 SNORA48.11-201ENST00000517015 89 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 SNORD11B-201ENST00000607707 90 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 AC093732.2-201ENST00000607950 274 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 AL357075.2-201ENST00000614906 189 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 AL449363.1-201ENST00000617815 186 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 AC130454.1-201ENST00000622948 401 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.81□□□□□ -1.96
PCDHA3Q9Y5H8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 RNU6-238P-201ENST00000363313 106 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 RNU1-112P-201ENST00000364401 164 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 RNU6-926P-201ENST00000384075 107 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 SNORD63-201ENST00000384262 68 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 Y_RNA.462-201ENST00000384268 102 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 COTL1P1-201ENST00000422309 375 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 CKS1BP2-201ENST00000497342 240 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 RNY3P15-201ENST00000516297 97 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 AC023824.2-201ENST00000566185 400 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 AC011476.5-201ENST00000615594 130 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 LINC02555-201ENST00000563933 1951 ntBASIC2.8□□□□□ -1.96
PCDHA3Q9Y5H8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 Y_RNA.19-201ENST00000362462 99 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 RNU1-109P-201ENST00000383960 147 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 SNORA67.2-201ENST00000384300 149 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 SNORD115-46-201ENST00000390982 71 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 AL033519.2-201ENST00000403958 392 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 RNA5SP21-201ENST00000410917 96 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 ARL5AP4-201ENST00000430731 512 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 LINC01399-202ENST00000458450 244 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 RNU6-1098P-201ENST00000516772 96 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 MYL12BP1-201ENST00000569826 507 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 LARP7P3-201ENST00000579888 337 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 AC090616.3-201ENST00000582184 217 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 MIR4503-201ENST00000582187 83 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 AC068205.3-201ENST00000636385 468 ntBASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHA3Q9Y5H8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 RNU6-234P-201ENST00000365229 104 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 RNU6-546P-201ENST00000383991 107 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 Y_RNA.556-201ENST00000384677 113 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 ELOCP21-201ENST00000412558 336 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 UQCRBP2-201ENST00000447827 297 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 RNU6-408P-201ENST00000515910 100 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 RNU5F-4P-201ENST00000516581 114 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 AC022616.8-201ENST00000533569 253 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 AC004486.1-201ENST00000546846 233 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 AK6P2-201ENST00000549020 471 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 RRN3P3-201ENST00000549207 578 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 AC018448.1-201ENST00000552843 316 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 AP000942.4-201ENST00000604811 241 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 U4.1-201ENST00000620349 87 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 MIR8062-201ENST00000621515 85 ntBASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PCDHA3Q9Y5H8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.64-201ENST00000362845 102 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.143-201ENST00000363520 106 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-961P-201ENST00000363893 105 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.222-201ENST00000364264 102 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.230-201ENST00000364348 109 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-1180P-201ENST00000364935 107 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 Y_RNA.452-201ENST00000384202 108 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 SNORA44-201ENST00000384584 132 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 RNU6-713P-201ENST00000384761 107 ntBASIC2.77□□□□□ -1.97
PCDHA3Q9Y5H8 MIR561-201ENST00000385216 97 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms