Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 RNU6-661P-201ENST00000362409 107 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 Y_RNA.94-201ENST00000363068 106 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 RNA5SP505-201ENST00000364748 108 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 SNORA70F-201ENST00000384142 135 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 RN7SKP156-201ENST00000410308 342 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 AC006463.2-201ENST00000473326 348 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 RN7SL812P-201ENST00000493791 279 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 AP000346.3-201ENST00000622821 210 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 MIR548BB-201ENST00000626714 66 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 MIR203B-201ENST00000636080 86 ntBASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS9D1Q9Y2B5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 Y_RNA.95-201ENST00000363079 95 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 MIR520G-201ENST00000385064 90 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 MIR605-201ENST00000385078 83 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 RPL32P35-201ENST00000415214 394 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 AC016909.1-201ENST00000415916 166 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 AC112771.1-201ENST00000463581 102 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 RPL7AP28-201ENST00000464513 571 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 MIR449C-201ENST00000516047 92 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 RNU6-1006P-201ENST00000516998 103 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 AC100770.1-201ENST00000532310 322 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 HIGD1AP1-201ENST00000550979 275 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 AC022217.4-201ENST00000604389 163 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 AC091979.2-201ENST00000607514 214 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 MIR6780A-201ENST00000615089 68 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 AL138721.1-201ENST00000616756 179 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 U4atac.1-201ENST00000618345 95 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 MIR1255B1-201ENST00000636325 63 ntBASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS9D1Q9Y2B5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 RNU4-67P-201ENST00000364569 141 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 Y_RNA.316-201ENST00000365118 111 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 RNU6-1235P-201ENST00000384559 107 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AL590139.1-201ENST00000416267 400 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 RNU6-498P-201ENST00000459468 107 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 Y_RNA.659-201ENST00000515994 113 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AC087685.1-201ENST00000587507 141 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AC073413.2-201ENST00000604332 360 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AC013412.1-201ENST00000610687 192 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 AL359075.3-201ENST00000613288 217 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 RN7SL722P-201ENST00000617780 284 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 RN7SL565P-201ENST00000618246 284 ntBASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS9D1Q9Y2B5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 SNORD115-19-201ENST00000363098 82 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 SNORD115-18-201ENST00000363293 82 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 Y_RNA.253-201ENST00000364562 112 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 SNORD115-17-201ENST00000364612 82 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 MIR192-201ENST00000384915 110 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 MIR708-201ENST00000390708 88 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 AC016397.1-201ENST00000412463 242 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 MIR4778-201ENST00000577635 80 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 AL136964.1-201ENST00000622038 2990 ntBASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS9D1Q9Y2B5 AC010889.1-201ENST00000566193 2666 ntBASIC4.41□□□□□ -1.7
VPS9D1Q9Y2B5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS9D1Q9Y2B5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS9D1Q9Y2B5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS9D1Q9Y2B5 MIR1294-201ENST00000408503 142 ntBASIC4.41□□□□□ -1.7
VPS9D1Q9Y2B5 RNA5SP146-201ENST00000410743 123 ntBASIC4.41□□□□□ -1.7
VPS9D1Q9Y2B5 HMGN2P21-201ENST00000447764 270 ntBASIC4.41□□□□□ -1.7
VPS9D1Q9Y2B5 AL133162.1-201ENST00000463228 453 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms