Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBP1Q9NZI7 RNU6-545P-201ENST00000362681 104 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 Y_RNA.262-201ENST00000364641 102 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 SNORD31B-201ENST00000364977 69 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 Y_RNA.361-201ENST00000365515 120 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 RNU6-211P-201ENST00000384047 107 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 FCF1P8-201ENST00000510322 597 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 MIR449C-201ENST00000516047 92 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.41□□□□□ -1.86
UBP1Q9NZI7 AL078604.3-201ENST00000615580 211 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.41□□□□□ -1.86
UBP1Q9NZI7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.41□□□□□ -1.86
UBP1Q9NZI7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.41□□□□□ -1.86
UBP1Q9NZI7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBP1Q9NZI7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
UBP1Q9NZI7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.41□□□□□ -1.86
UBP1Q9NZI7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
UBP1Q9NZI7 SNORD114-7-201ENST00000362520 77 ntBASIC3.4□□□□□ -1.87
UBP1Q9NZI7 RNA5SP50-201ENST00000363731 107 ntBASIC3.4□□□□□ -1.87
UBP1Q9NZI7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.4□□□□□ -1.87
UBP1Q9NZI7 BTF3P11-201ENST00000426582 477 ntBASIC3.4□□□□□ -1.87
UBP1Q9NZI7 AC107393.1-201ENST00000512403 346 ntBASIC3.4□□□□□ -1.87
UBP1Q9NZI7 AC136628.3-201ENST00000521868 290 ntBASIC3.4□□□□□ -1.87
UBP1Q9NZI7 MIR5692C2-201ENST00000577959 77 ntBASIC3.4□□□□□ -1.87
UBP1Q9NZI7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.4□□□□□ -1.87
UBP1Q9NZI7 RMST_8.1-201ENST00000610287 165 ntBASIC3.4□□□□□ -1.87
UBP1Q9NZI7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.4□□□□□ -1.87
UBP1Q9NZI7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
UBP1Q9NZI7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.87
UBP1Q9NZI7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.87
UBP1Q9NZI7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 RNA5SP240-201ENST00000365355 128 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 MIR95-201ENST00000385072 81 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 FO393413.1-201ENST00000402892 195 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 AC009969.1-201ENST00000438726 172 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 RNU7-170P-201ENST00000459303 61 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 RNU7-57P-201ENST00000459540 60 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 RN7SL601P-201ENST00000471221 293 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 RPS29P2-201ENST00000479278 136 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 RN7SL293P-201ENST00000481765 281 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 AL159152.1-201ENST00000635019 2587 ntBASIC3.39□□□□□ -1.87
UBP1Q9NZI7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBP1Q9NZI7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBP1Q9NZI7 RNU1-70P-201ENST00000362618 164 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 SNORD21-201ENST00000383953 95 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 Y_RNA.435-201ENST00000384095 112 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 Y_RNA.464-201ENST00000384282 110 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 MIR23A-201ENST00000385245 73 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AL161788.1-201ENST00000441805 169 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.38□□□□□ -1.87
UBP1Q9NZI7 CYCSP35-201ENST00000451978 304 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 RPL21P10-201ENST00000463521 490 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AC010401.1-201ENST00000463867 348 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 CKS1BP2-201ENST00000497342 240 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AC023141.11-201ENST00000508864 202 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AC023043.3-201ENST00000593113 385 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AL365265.1-201ENST00000621045 234 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 snoZ196.1-201ENST00000625269 89 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBP1Q9NZI7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AC092435.3-201ENST00000565538 3654 ntBASIC3.38□□□□□ -1.87
UBP1Q9NZI7 AL355596.1-201ENST00000565399 3996 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 RNU6-546P-201ENST00000383991 107 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 RNU6-975P-201ENST00000384296 105 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 PCNPP3-201ENST00000393579 471 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AL139095.1-201ENST00000404326 391 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 MIR1289-1-201ENST00000408836 144 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 COX6CP10-201ENST00000416832 224 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 OOSP1P1-201ENST00000423265 274 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AC016925.1-201ENST00000458303 298 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AC008155.2-201ENST00000464337 397 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AC090515.1-201ENST00000465295 476 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.37□□□□□ -1.87
UBP1Q9NZI7 ATP5EP1-201ENST00000510257 156 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AC022616.8-201ENST00000533569 253 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 MIR4276-201ENST00000584832 70 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AL133393.1-201ENST00000603277 287 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AL008718.3-201ENST00000610217 321 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AC017071.1-201ENST00000564407 2204 ntBASIC3.37□□□□□ -1.87
UBP1Q9NZI7 AL356274.2-201ENST00000624379 3752 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms