Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 MTCO2P31-201ENST00000402702 684 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 AL590135.1-201ENST00000422215 156 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 AL354692.1-201ENST00000423044 315 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 AC019205.3-201ENST00000424573 156 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 MTCO1P20-201ENST00000425366 358 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 AC016700.2-201ENST00000446011 156 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 AC015911.1-201ENST00000495111 156 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 RNU2-60P-201ENST00000517290 128 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 MIR4637-201ENST00000582405 84 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 AC068790.2-201ENST00000602601 557 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 AC064872.1-201ENST00000604823 1072 ntBASIC-1.51□□□□□ -2.65
SMCO4Q9NRQ5 SNORD56.1-201ENST00000362913 68 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 SNORA3B-201ENST00000391305 131 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 CDK8P2-201ENST00000415020 547 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 AL365338.1-201ENST00000422282 858 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 RPL39P6-201ENST00000448289 150 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 AL139824.2-201ENST00000458731 1095 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 AP001328.1-201ENST00000528550 176 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 MIR3681-201ENST00000580089 72 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 AC087685.1-201ENST00000587507 141 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 AC110760.3-201ENST00000598794 467 ntBASIC-1.52□□□□□ -2.65
SMCO4Q9NRQ5 RNU6-417P-201ENST00000384712 107 ntBASIC-1.53□□□□□ -2.65
SMCO4Q9NRQ5 MIR548L-201ENST00000408303 86 ntBASIC-1.53□□□□□ -2.65
SMCO4Q9NRQ5 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.53□□□□□ -2.65
SMCO4Q9NRQ5 snoU109.2-201ENST00000459316 135 ntBASIC-1.53□□□□□ -2.65
SMCO4Q9NRQ5 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.53□□□□□ -2.65
SMCO4Q9NRQ5 AC022447.4-201ENST00000504053 364 ntBASIC-1.53□□□□□ -2.65
SMCO4Q9NRQ5 AC138869.1-201ENST00000568623 124 ntBASIC-1.53□□□□□ -2.65
SMCO4Q9NRQ5 TMF1P1-201ENST00000576058 373 ntBASIC-1.53□□□□□ -2.65
SMCO4Q9NRQ5 RNU6-839P-201ENST00000363347 108 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 RNU6-187P-201ENST00000384139 106 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AL359634.1-202ENST00000404721 284 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AC007000.2-201ENST00000442564 487 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AC007327.1-201ENST00000447461 264 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AC093850.1-201ENST00000454121 251 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AC107297.1-201ENST00000459991 176 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 RPL39P34-201ENST00000477141 156 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AC010468.3-201ENST00000508225 458 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AC113347.3-201ENST00000509113 148 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 MTND3P5-201ENST00000512798 333 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AC100830.2-201ENST00000581636 240 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AC078795.3-201ENST00000602913 472 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 AL359075.3-201ENST00000613288 217 ntBASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.54□□□□□ -2.66
SMCO4Q9NRQ5 MTCYBP2-201ENST00000407745 171 ntBASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 RNU6-564P-201ENST00000410983 104 ntBASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 DEFB130D-201ENST00000426866 237 ntBASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 AC006026.2-201ENST00000457376 180 ntBASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 RNU6-138P-201ENST00000515952 107 ntBASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 NAMPTP3-201ENST00000569273 224 ntBASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 AL590491.3-201ENST00000610731 82 ntBASIC-1.55□□□□□ -2.66
SMCO4Q9NRQ5 SNORD95.1-201ENST00000364099 68 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 RNA5SP368-201ENST00000364298 116 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 RNU6-142P-201ENST00000384019 107 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 RNU6-891P-201ENST00000384280 111 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 RNU6-424P-201ENST00000384367 105 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 MIR196A1-201ENST00000388006 70 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 SNORA26-201ENST00000391286 122 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 AL079342.2-201ENST00000403367 482 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 BTF3P11-201ENST00000426582 477 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 RPS23P5-201ENST00000495419 428 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 RNU1-142P-201ENST00000516682 145 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 IGKV1-22-201ENST00000524313 326 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 AC012507.3-201ENST00000603556 477 ntBASIC-1.56□□□□□ -2.66
SMCO4Q9NRQ5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 MTCYBP39-201ENST00000437562 491 ntBASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 AC004584.2-201ENST00000570407 410 ntBASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 MIR4804-201ENST00000581683 73 ntBASIC-1.57□□□□□ -2.66
SMCO4Q9NRQ5 RNU1-76P-201ENST00000362903 159 ntBASIC-1.58□□□□□ -2.66
SMCO4Q9NRQ5 ERHP2-201ENST00000402323 299 ntBASIC-1.58□□□□□ -2.66
SMCO4Q9NRQ5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-1.58□□□□□ -2.66
SMCO4Q9NRQ5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.58□□□□□ -2.66
SMCO4Q9NRQ5 SNORA28-201ENST00000606769 126 ntBASIC-1.58□□□□□ -2.66
SMCO4Q9NRQ5 MIR6779-201ENST00000617283 64 ntBASIC-1.58□□□□□ -2.66
SMCO4Q9NRQ5 AC106754.1-201ENST00000562632 1513 ntBASIC-1.59□□□□□ -2.66
SMCO4Q9NRQ5 RNU6-252P-201ENST00000363232 107 ntBASIC-1.59□□□□□ -2.66
SMCO4Q9NRQ5 MIR563-201ENST00000385080 79 ntBASIC-1.59□□□□□ -2.66
SMCO4Q9NRQ5 AC106883.1-201ENST00000418805 562 ntBASIC-1.59□□□□□ -2.66
SMCO4Q9NRQ5 Z95118.1-201ENST00000421372 247 ntBASIC-1.59□□□□□ -2.66
SMCO4Q9NRQ5 CALM2P4-201ENST00000430810 426 ntBASIC-1.59□□□□□ -2.66
SMCO4Q9NRQ5 MTND4P25-201ENST00000441039 533 ntBASIC-1.59□□□□□ -2.66
SMCO4Q9NRQ5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms