Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MIR548I2-201ENST00000408348 149 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 Y_RNA.590-201ENST00000410140 107 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 RN7SKP51-201ENST00000410781 304 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 RNU2-61P-201ENST00000411069 191 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 MTCO1P5-201ENST00000433573 344 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.2□□□□□ -1.9
TLR9Q9NR96 AP000705.1-201ENST00000454567 350 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.2□□□□□ -1.9
TLR9Q9NR96 AC091959.1-201ENST00000495857 238 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.2□□□□□ -1.9
TLR9Q9NR96 AC025281.1-201ENST00000567026 265 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 RPS15AP11-201ENST00000594193 385 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 AL078605.1-201ENST00000603529 500 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 AC072026.1-201ENST00000605023 201 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 AL357075.2-201ENST00000614906 189 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 AC021753.1-201ENST00000635724 168 ntBASIC3.2□□□□□ -1.9
TLR9Q9NR96 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
TLR9Q9NR96 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.2□□□□□ -1.9
TLR9Q9NR96 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TLR9Q9NR96 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.2□□□□□ -1.9
TLR9Q9NR96 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TLR9Q9NR96 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.2□□□□□ -1.9
TLR9Q9NR96 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TLR9Q9NR96 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.19□□□□□ -1.9
TLR9Q9NR96 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TLR9Q9NR96 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TLR9Q9NR96 MIR410-201ENST00000362222 80 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 Y_RNA.136-201ENST00000363444 102 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 Y_RNA.170-201ENST00000363746 110 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 Y_RNA.230-201ENST00000364348 109 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 RNU6-1175P-201ENST00000365200 107 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 SNORD113-1-201ENST00000365321 69 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 AC012306.1-201ENST00000423267 114 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.19□□□□□ -1.9
TLR9Q9NR96 AC019205.3-201ENST00000424573 156 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 MRPS10P1-201ENST00000448483 130 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 RPL23AP3-201ENST00000453844 468 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.19□□□□□ -1.9
TLR9Q9NR96 AL441985.1-201ENST00000457727 251 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 snoU13.6-201ENST00000458785 104 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.19□□□□□ -1.9
TLR9Q9NR96 AC008413.1-201ENST00000511864 177 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 SNORA40.9-201ENST00000515895 93 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 SNORA31.16-201ENST00000516773 139 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 AC107016.2-201ENST00000547968 190 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 RPL21P9-201ENST00000556149 474 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.19□□□□□ -1.9
TLR9Q9NR96 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.19□□□□□ -1.9
TLR9Q9NR96 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
TLR9Q9NR96 AC008749.1-201ENST00000597650 306 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 AL138963.2-201ENST00000605137 226 ntBASIC3.19□□□□□ -1.9
TLR9Q9NR96 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TLR9Q9NR96 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TLR9Q9NR96 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TLR9Q9NR96 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.18□□□□□ -1.9
TLR9Q9NR96 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TLR9Q9NR96 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TLR9Q9NR96 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TLR9Q9NR96 RNU6-1010P-201ENST00000362757 107 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 MIR147B-201ENST00000390185 80 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 RNU6-918P-201ENST00000391219 106 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 AL133475.1-201ENST00000404414 305 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 RPL19P1-201ENST00000411635 428 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 AL358075.3-201ENST00000426289 226 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 AL031183.1-201ENST00000457667 207 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 SNORD2.1-201ENST00000458762 69 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 AC090525.1-201ENST00000479116 478 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 RNU6-1198P-201ENST00000516904 67 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.18□□□□□ -1.9
TLR9Q9NR96 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.18□□□□□ -1.9
TLR9Q9NR96 AC105137.2-201ENST00000569073 466 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 MIR3136-201ENST00000583498 78 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 AC132825.6-201ENST00000638861 357 ntBASIC3.18□□□□□ -1.9
TLR9Q9NR96 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TLR9Q9NR96 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TLR9Q9NR96 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TLR9Q9NR96 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TLR9Q9NR96 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 RNU6-514P-201ENST00000384208 107 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 RNU6-1289P-201ENST00000384431 106 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 RNU1-101P-201ENST00000391171 127 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 AL390729.2-201ENST00000416137 156 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 TRIAP1P1-201ENST00000427062 225 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.17□□□□□ -1.9
TLR9Q9NR96 snoU13.14-201ENST00000459372 104 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 RNU6-1278P-201ENST00000516130 107 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 Y_RNA.679-201ENST00000516416 91 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 SNORA27.4-201ENST00000516650 95 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 RNU6-711P-201ENST00000517255 106 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.17□□□□□ -1.9
TLR9Q9NR96 AC055872.1-201ENST00000570978 278 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 AC073476.4-201ENST00000628409 72 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 SNORD98-201ENST00000636377 67 ntBASIC3.17□□□□□ -1.9
TLR9Q9NR96 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TLR9Q9NR96 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TLR9Q9NR96 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.16□□□□□ -1.9
TLR9Q9NR96 RNU6-873P-201ENST00000363833 107 ntBASIC3.16□□□□□ -1.9
TLR9Q9NR96 Y_RNA.233-201ENST00000364407 101 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms