Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF39Q9H2S5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 Y_RNA.375-201ENST00000365625 101 ntBASIC5.49□□□□□ -1.53
RNF39Q9H2S5 SNORA2.3-201ENST00000383920 135 ntBASIC5.49□□□□□ -1.53
RNF39Q9H2S5 MIR4500-201ENST00000579472 76 ntBASIC5.49□□□□□ -1.53
RNF39Q9H2S5 AC243994.1-201ENST00000618627 109 ntBASIC5.49□□□□□ -1.53
RNF39Q9H2S5 uc_338.10-201ENST00000621872 182 ntBASIC5.49□□□□□ -1.53
RNF39Q9H2S5 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF39Q9H2S5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 RNA5SP223-201ENST00000365174 120 ntBASIC5.48□□□□□ -1.53
RNF39Q9H2S5 RNU6-1254P-201ENST00000391266 104 ntBASIC5.48□□□□□ -1.53
RNF39Q9H2S5 Z98742.2-201ENST00000431564 187 ntBASIC5.48□□□□□ -1.53
RNF39Q9H2S5 RN7SL319P-201ENST00000480656 221 ntBASIC5.48□□□□□ -1.53
RNF39Q9H2S5 SCARNA21.1-201ENST00000515996 128 ntBASIC5.48□□□□□ -1.53
RNF39Q9H2S5 MRPL49P2-201ENST00000521066 465 ntBASIC5.48□□□□□ -1.53
RNF39Q9H2S5 RN7SL290P-201ENST00000578661 300 ntBASIC5.48□□□□□ -1.53
RNF39Q9H2S5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 AC027279.3-201ENST00000625055 122 ntBASIC5.48□□□□□ -1.53
RNF39Q9H2S5 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
RNF39Q9H2S5 AP000648.3-201ENST00000623539 4507 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 AL450345.1-202ENST00000605741 3881 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 RNU6-668P-201ENST00000364180 107 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 SNORA56-201ENST00000383966 129 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 SNORA77-201ENST00000408716 125 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 RN7SKP220-201ENST00000410611 288 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 AL671862.1-201ENST00000515851 349 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 MIR5195-201ENST00000583555 115 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 SNORD14A-201ENST00000606526 91 ntBASIC5.47□□□□□ -1.53
RNF39Q9H2S5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RNF39Q9H2S5 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF39Q9H2S5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF39Q9H2S5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
RNF39Q9H2S5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.46□□□□□ -1.53
RNF39Q9H2S5 AP000542.2-201ENST00000623199 6179 ntBASIC5.46□□□□□ -1.53
RNF39Q9H2S5 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
RNF39Q9H2S5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
RNF39Q9H2S5 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RNF39Q9H2S5 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF39Q9H2S5 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RNF39Q9H2S5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF39Q9H2S5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RNF39Q9H2S5 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RNF39Q9H2S5 RNU6-930P-201ENST00000390938 100 ntBASIC5.46□□□□□ -1.54
RNF39Q9H2S5 AL096861.1-201ENST00000610899 123 ntBASIC5.46□□□□□ -1.54
RNF39Q9H2S5 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RNF39Q9H2S5 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF39Q9H2S5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 RNA5SP191-201ENST00000362585 102 ntBASIC5.45□□□□□ -1.54
RNF39Q9H2S5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 RNA5SP87-201ENST00000384155 118 ntBASIC5.45□□□□□ -1.54
RNF39Q9H2S5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 MTND4LP1-201ENST00000446263 157 ntBASIC5.45□□□□□ -1.54
RNF39Q9H2S5 RNU6-586P-201ENST00000517265 104 ntBASIC5.45□□□□□ -1.54
RNF39Q9H2S5 MIR3609-201ENST00000582661 80 ntBASIC5.45□□□□□ -1.54
RNF39Q9H2S5 MIR4765-201ENST00000585007 77 ntBASIC5.45□□□□□ -1.54
RNF39Q9H2S5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RNF39Q9H2S5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
RNF39Q9H2S5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF39Q9H2S5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RNF39Q9H2S5 RNVU1-6-201ENST00000364688 164 ntBASIC5.44□□□□□ -1.54
RNF39Q9H2S5 RNY1P13-201ENST00000365030 105 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms