Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 AC093831.2-201ENST00000624393 3427 ntBASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CCDC113Q9H0I3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 RNU6-525P-201ENST00000363685 104 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 MIR561-201ENST00000385216 97 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 ELOCP21-201ENST00000412558 336 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 RAB28P5-201ENST00000427490 651 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 ARL5AP4-201ENST00000430731 512 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AL139132.1-201ENST00000431587 344 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AC244505.4-201ENST00000434905 287 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 UBBP3-201ENST00000445497 241 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 RPS29P26-201ENST00000477483 171 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AC018630.3-201ENST00000542637 96 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AK6P2-201ENST00000549020 471 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 SNORD113-5-201ENST00000607261 78 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AC062037.2-201ENST00000610137 73 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 AC107871.2-201ENST00000612894 502 ntBASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC113Q9H0I3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 Y_RNA.84-201ENST00000363011 104 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 RNU6-1175P-201ENST00000365200 107 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 RNU6-438P-201ENST00000365561 103 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 MIR215-201ENST00000384858 110 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 MIR300-201ENST00000401138 83 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 RNU2-25P-201ENST00000411041 191 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 RPL23AP36-201ENST00000413895 458 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 AC091826.1-201ENST00000514065 313 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 RNA5SP385-201ENST00000515947 110 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 AC022616.8-201ENST00000533569 253 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 AC022080.3-201ENST00000544433 482 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 MIR4753-201ENST00000585119 83 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 AC006001.4-201ENST00000622243 395 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 MIR3674-201ENST00000636576 68 ntBASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
CCDC113Q9H0I3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 RNU6-545P-201ENST00000362681 104 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 RNU6-743P-201ENST00000364151 106 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 MIR95-201ENST00000385072 81 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 MT-TW-201ENST00000387382 68 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 RNU4-30P-201ENST00000410245 143 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 RN7SKP58-201ENST00000411010 305 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 AC074290.1-201ENST00000448883 135 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 AC109329.2-201ENST00000519658 482 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 EIF4BP1-201ENST00000554881 351 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 AL033523.1-201ENST00000605153 153 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 AC004467.1-201ENST00000615678 330 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.27□□□□□ -1.89
CCDC113Q9H0I3 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 AC010615.1-201ENST00000594254 1764 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 RNU4-90P-201ENST00000362773 141 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 SNORA51.4-201ENST00000364993 124 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 BMS1P22-201ENST00000414726 313 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 SNORA48.11-201ENST00000517015 89 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 AC110588.1-201ENST00000559699 137 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 AC090616.3-201ENST00000582184 217 ntBASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC113Q9H0I3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 AC000403.1-201ENST00000613696 3585 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 snoU2_19.2-201ENST00000363024 80 ntBASIC3.25□□□□□ -1.89
CCDC113Q9H0I3 Y_RNA.188-201ENST00000363952 111 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms