Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MIR7159-201ENST00000620587 66 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 RNA5SP308-201ENST00000362532 115 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 SNORA43.1-201ENST00000364863 140 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 RNU1-84P-201ENST00000365447 164 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 RNU6-1162P-201ENST00000384443 104 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 AC026310.1-201ENST00000396004 378 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 snoU13.27-201ENST00000459278 104 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 RNA5SP164-201ENST00000516533 110 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 SCARNA11.1-201ENST00000516918 132 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 IGKV1D-32-201ENST00000517449 318 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR378H-201ENST00000579966 83 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR132-201ENST00000591554 101 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 AL606490.9-201ENST00000603331 271 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 AP000942.3-201ENST00000603702 160 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR7110-201ENST00000612638 86 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 uc_338.6-201ENST00000613544 171 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR6726-201ENST00000613751 61 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 AL137067.2-201ENST00000621202 131 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 AC027506.1-201ENST00000621395 198 ntBASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRTAP3-3Q9BYR6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.93
KRTAP3-3Q9BYR6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC3.03□□□□□ -1.93
KRTAP3-3Q9BYR6 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
KRTAP3-3Q9BYR6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 RNU1-5P-201ENST00000362684 144 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 SNORD1C-201ENST00000363315 78 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 Y_RNA.209-201ENST00000364156 111 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 Y_RNA.250-201ENST00000364542 110 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 SNORA41B-201ENST00000384785 128 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 MIR29C-201ENST00000385231 88 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 KRT8P51-201ENST00000438938 274 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 RN7SL372P-201ENST00000461982 298 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 AC055731.1-201ENST00000474387 401 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 RN7SL714P-201ENST00000487050 298 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 RNU6-322P-201ENST00000516010 103 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 IGLVVII-41-1-201ENST00000518405 151 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 MIR6849-201ENST00000618543 69 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 MVP-219ENST00000629059 120 ntTSL 5 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 AC000095.2-202ENST00000637415 154 ntBASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRTAP3-3Q9BYR6 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRTAP3-3Q9BYR6 SNORA68.1-201ENST00000364537 132 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms