Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.09□□□□□ -1.91
LRRTM3Q86VH5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRTM3Q86VH5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.09□□□□□ -1.92
LRRTM3Q86VH5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LRRTM3Q86VH5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 Y_RNA.26-201ENST00000362539 101 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 RNU1-23P-201ENST00000363361 144 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 RNA5SP125-201ENST00000364843 120 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 RNU6-702P-201ENST00000364982 107 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 SNORA72.2-201ENST00000365028 127 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 MIR586-201ENST00000385035 97 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 RNU2-20P-201ENST00000410425 191 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 RNA5SP492-201ENST00000411330 114 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 ELOCP21-201ENST00000412558 336 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 AL139281.1-201ENST00000422120 335 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 RNA5SP367-201ENST00000516557 118 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 RN7SKP40-201ENST00000517211 242 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 AC005176.2-201ENST00000596933 147 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 MIR6852-201ENST00000621699 66 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 AC008873.1-201ENST00000625051 138 ntBASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
LRRTM3Q86VH5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 Y_RNA.105-201ENST00000363182 111 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 Y_RNA.461-201ENST00000384263 103 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 RNU6-851P-201ENST00000384565 107 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 AL357139.1-201ENST00000407792 426 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 RNU6-121P-201ENST00000410525 99 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 AC096920.1-201ENST00000423991 241 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 RAB28P5-201ENST00000427490 651 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 AC104389.3-201ENST00000445629 235 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 AC074290.1-201ENST00000448883 135 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 AC079600.2-201ENST00000550076 130 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 GTF3AP2-201ENST00000557014 266 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 AC011373.1-201ENST00000607270 237 ntBASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
LRRTM3Q86VH5 MIR148B-201ENST00000362252 99 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 U3.8-201ENST00000363675 217 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 SNORD56.5-201ENST00000364281 72 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 SNORD87-201ENST00000364849 89 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 SNORD31B-201ENST00000364977 69 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 SNORA67.2-201ENST00000384300 149 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 MIR1283-1-201ENST00000408494 87 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 RNA5SP475-201ENST00000410568 110 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 RNA5SP504-201ENST00000410676 117 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 RPL21P38-201ENST00000418090 167 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 NDUFB4P10-201ENST00000452541 359 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 MIR4753-201ENST00000585119 83 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
LRRTM3Q86VH5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 RNU6-545P-201ENST00000362681 104 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 SNORD113-8-201ENST00000363497 74 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 SNORA5B-201ENST00000363786 132 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 Y_RNA.193-201ENST00000363979 102 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 SNORA9.2-201ENST00000365361 133 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 RNU6-438P-201ENST00000365561 103 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 Y_RNA.401-201ENST00000383965 117 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 AC114982.1-201ENST00000469402 321 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 RNU7-110P-201ENST00000516891 62 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 MIR4423-201ENST00000580922 80 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 U4atac.1-201ENST00000618345 95 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 MIR1248-201ENST00000629190 106 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 MIR3674-201ENST00000636576 68 ntBASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LRRTM3Q86VH5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LRRTM3Q86VH5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LRRTM3Q86VH5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms