Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SNORA51.10-201ENST00000384418 136 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 Y_RNA.528-201ENST00000384575 108 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 MIR554-201ENST00000384874 96 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 SNORD12C-201ENST00000386307 89 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 snoU13.28-201ENST00000459235 104 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 AC010598.1-201ENST00000510378 103 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 RNA5SP143-201ENST00000516936 115 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 RNA5SP179-201ENST00000517284 121 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 AC105245.1-201ENST00000581934 244 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 AC091167.4-201ENST00000605079 184 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 RPL17P51-201ENST00000605218 238 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 MIR92B-201ENST00000607575 96 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 MIR486-1-201ENST00000612171 68 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 MIR6500-201ENST00000622700 86 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 MIR624-201ENST00000385217 97 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 AL138878.1-201ENST00000405131 347 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 YME1L1P1-201ENST00000429435 297 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 AL353705.1-201ENST00000433468 480 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 RNU7-57P-201ENST00000459540 60 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 AC005921.1-201ENST00000510589 286 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 RNA5SP20-201ENST00000515976 84 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 RNU1-104P-201ENST00000517280 175 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 AC027419.1-201ENST00000522976 328 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 AP003327.1-201ENST00000529684 127 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 YPEL5P3-201ENST00000547227 352 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 MIR3690-201ENST00000580266 75 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 AL929325.1-201ENST00000603096 117 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 MIR6875-201ENST00000617506 72 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LYSMD3Q7Z3D4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 SNORA62.3-201ENST00000365110 153 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 SNORD14D-201ENST00000384390 87 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 MIR147B-201ENST00000390185 80 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 RNA5SP511-201ENST00000410487 115 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 RNA5SP127-201ENST00000411051 133 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 AC023632.4-201ENST00000517783 191 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 RPL23AP91-201ENST00000569211 455 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 MIR3609-201ENST00000582661 80 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 AL606490.9-201ENST00000603331 271 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 AL110115.1-201ENST00000614396 364 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 AL591424.2-201ENST00000617023 128 ntBASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LYSMD3Q7Z3D4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 RNA5SP189-201ENST00000364920 115 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 RNU1-57P-201ENST00000384491 166 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 Y_RNA.549-201ENST00000384657 102 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 Z98941.1-201ENST00000407764 100 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 MIR1302-5-201ENST00000408164 150 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 RNU2-49P-201ENST00000410666 184 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 AC083863.1-201ENST00000438811 231 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 MTATP6P21-201ENST00000440681 189 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 RNA5SP310-201ENST00000459084 116 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 AC080013.2-201ENST00000460866 323 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 PPIAP15-201ENST00000479662 484 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 AC015720.1-201ENST00000565251 277 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 MIR4429-201ENST00000580105 73 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 AC007496.3-201ENST00000624987 3443 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 AL161912.2-201ENST00000565707 3007 ntBASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LYSMD3Q7Z3D4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 RNU4-13P-201ENST00000364019 141 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 MIR181A2-201ENST00000384863 110 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 RNU6-1275P-201ENST00000391087 107 ntBASIC3.94□□□□□ -1.78
LYSMD3Q7Z3D4 SNORA26-201ENST00000391286 122 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms