Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CHMP1BQ7LBR1 MIR340-201ENST00000362125 95 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 Y_RNA.138-201ENST00000363462 102 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 SNORD115-32-201ENST00000364079 82 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 RNU4-56P-201ENST00000364700 142 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 Y_RNA.384-201ENST00000383909 102 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 RNU6-26P-201ENST00000383985 107 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 MIR1294-201ENST00000408503 142 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 AC009238.1-201ENST00000442165 424 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 AC009237.6-201ENST00000446969 424 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 MTCO3P8-201ENST00000453691 755 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 RNU6-991P-201ENST00000516168 107 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 NDUFA5P6-201ENST00000542110 379 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 AC104581.2-201ENST00000572227 430 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 AC087588.2-201ENST00000617667 426 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.91□□□□□ -2.1
CHMP1BQ7LBR1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
CHMP1BQ7LBR1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.9□□□□□ -2.1
CHMP1BQ7LBR1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 Y_RNA.813-201ENST00000364639 102 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 RNU6-234P-201ENST00000365229 104 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 Y_RNA.463-201ENST00000384271 102 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 HMGN2P18-201ENST00000450680 270 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 snoU13.26-201ENST00000459452 105 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 AP000870.1-201ENST00000472927 406 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 AC027575.1-201ENST00000481064 460 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 RNU6-470P-201ENST00000515954 104 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 RNU6-699P-201ENST00000517081 110 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 RMST_6.1-201ENST00000611980 203 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 AC022140.2-201ENST00000623500 188 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 ZNF204P-201ENST00000416749 2397 ntBASIC1.9□□□□□ -2.11
CHMP1BQ7LBR1 MIR369-201ENST00000362155 70 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 Y_RNA.31-201ENST00000362574 102 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 RNU1-76P-201ENST00000362903 159 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 SNORD42.2-201ENST00000365570 69 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 MIR10B-201ENST00000385011 110 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AL355497.1-201ENST00000406262 551 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 EDDM3CP-201ENST00000415977 425 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AL590556.1-201ENST00000423231 483 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AL121890.1-201ENST00000435457 205 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AL021397.1-201ENST00000451806 248 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 RN7SKP210-201ENST00000459176 261 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 RPL17P19-201ENST00000489069 552 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AC093259.1-201ENST00000509755 300 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 Y_RNA.661-201ENST00000516003 99 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 RNU1-41P-201ENST00000516161 162 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 RNU1-48P-201ENST00000516400 162 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 RNU2-44P-201ENST00000516795 194 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AC104984.5-201ENST00000586878 94 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AC080078.3-201ENST00000605407 463 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 AC126177.8-201ENST00000618339 1015 ntBASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CHMP1BQ7LBR1 MTND5P16-201ENST00000460269 1703 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 AP006437.1-201ENST00000641440 3685 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 CENPCP1-201ENST00000533085 2578 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 ZNF72P-201ENST00000425869 1908 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 SNORD115-8-201ENST00000363856 82 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 SNORA38-201ENST00000363946 132 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 SNORD115-38-201ENST00000365037 82 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 RNU6-1040P-201ENST00000383974 107 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 RNU6-474P-201ENST00000384243 107 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 RNU6-611P-201ENST00000384276 104 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 RNU6-308P-201ENST00000390957 107 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 RNA5SP504-201ENST00000410676 117 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 AC004386.2-201ENST00000441858 148 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 RPS27P21-201ENST00000486977 252 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 RNU7-175P-201ENST00000515915 61 ntBASIC1.88□□□□□ -2.11
CHMP1BQ7LBR1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms