Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 U8.12-201ENST00000384701 133 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 SNORD12C-201ENST00000386307 89 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 CYCSP48-201ENST00000417124 323 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 AL365496.1-201ENST00000426885 215 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 NDUFB1P1-201ENST00000435191 180 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 RNU6-1299P-201ENST00000516316 100 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 RN7SKP83-201ENST00000516512 178 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 RNU7-143P-201ENST00000516781 65 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 AC025647.1-201ENST00000517879 253 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 AL137843.1-201ENST00000605078 385 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 MIR6075-201ENST00000620782 95 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 RNA5SP125-201ENST00000364843 120 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 AP002088.1-201ENST00000382740 395 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 RNU6-440P-201ENST00000390882 105 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 RPL23AP82-202ENST00000427528 469 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 AL121890.1-201ENST00000435457 205 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 RPL23AP7-203ENST00000449021 469 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 CENPBD1P1-201ENST00000464061 469 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 AC078817.1-201ENST00000492623 435 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 AC145146.1-201ENST00000496370 254 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 RNU6-412P-201ENST00000516434 106 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 RNA5SP73-201ENST00000516744 108 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 AC022655.2-201ENST00000577280 318 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 MIR3944-201ENST00000581277 108 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 MIR4444-1-201ENST00000581696 74 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 MIR4444-2-201ENST00000584390 74 ntBASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXR1Q6PIV2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
FOXR1Q6PIV2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXR1Q6PIV2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
FOXR1Q6PIV2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXR1Q6PIV2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
FOXR1Q6PIV2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
FOXR1Q6PIV2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXR1Q6PIV2 SNORD46.1-201ENST00000364139 104 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 RNU6-1323P-201ENST00000384025 107 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 Y_RNA.528-201ENST00000384575 108 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 YME1L1P1-201ENST00000429435 297 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4□□□□□ -1.77
FOXR1Q6PIV2 RN7SKP43-201ENST00000516173 320 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 RNU6-63P-201ENST00000516690 95 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 AC027176.1-201ENST00000560204 514 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 AC008739.3-201ENST00000603262 127 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
FOXR1Q6PIV2 AC007256.1-201ENST00000392253 2765 ntBASIC4□□□□□ -1.77
FOXR1Q6PIV2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4□□□□□ -1.77
FOXR1Q6PIV2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4□□□□□ -1.77
FOXR1Q6PIV2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
FOXR1Q6PIV2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 AL356292.1-201ENST00000283110 373 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 SNORA71.3-201ENST00000362582 128 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 RNU6-1279P-201ENST00000383917 103 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 RNA5SP496-201ENST00000391240 109 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 RNU2-55P-201ENST00000411146 174 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 TRBV12-2-201ENST00000489763 344 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 RNU6-109P-201ENST00000516364 107 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 SNORA40.13-201ENST00000516379 120 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 RNU6-184P-201ENST00000516514 107 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 AL160236.1-201ENST00000556317 195 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 AC093732.2-201ENST00000607950 274 ntBASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXR1Q6PIV2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 AC103988.1-201ENST00000566382 2177 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 MIR208A-201ENST00000362287 71 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 RNU6-674P-201ENST00000363831 107 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 RNU6-1305P-201ENST00000364353 104 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 RNU6-283P-201ENST00000364788 107 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 Y_RNA.634-201ENST00000364811 113 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 SNORA12-201ENST00000391162 147 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 AL590004.2-201ENST00000404787 371 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 CALM2P4-201ENST00000430810 426 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 HMGN2P21-201ENST00000447764 270 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 AL021397.1-201ENST00000451806 248 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 SNORD108-201ENST00000459332 71 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 AL035470.1-201ENST00000622571 220 ntBASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXR1Q6PIV2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms