Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCRAQ6ISU1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 RNU6-440P-201ENST00000390882 105 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 AL031121.1-201ENST00000406553 254 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 MIR1294-201ENST00000408503 142 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 AC002075.2-201ENST00000425207 252 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 RN7SKP18-201ENST00000516005 275 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 GNRHR2P1-201ENST00000555315 631 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 AL137067.1-201ENST00000615933 120 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 AP003122.5-201ENST00000527668 3766 ntBASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCRAQ6ISU1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTCRAQ6ISU1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.15□□□□□ -1.74
PTCRAQ6ISU1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTCRAQ6ISU1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.15□□□□□ -1.74
PTCRAQ6ISU1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTCRAQ6ISU1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTCRAQ6ISU1 AC011266.1-201ENST00000624119 3569 ntBASIC4.15□□□□□ -1.74
PTCRAQ6ISU1 RNU1-44P-201ENST00000384453 163 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 SNORD96B-201ENST00000386148 79 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 AL133162.1-201ENST00000463228 453 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 AP001486.1-201ENST00000463339 476 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 RPL39P34-201ENST00000477141 156 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 RPL30P14-201ENST00000482744 348 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 AC093663.1-201ENST00000497190 394 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 RN7SKP43-201ENST00000516173 320 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 Y_RNA.685-201ENST00000516532 108 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 AC107294.3-201ENST00000609211 526 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 AC027290.2-201ENST00000623210 18662 ntBASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTCRAQ6ISU1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 RNU6-198P-201ENST00000384258 104 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 RNU6-820P-201ENST00000384273 107 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 SNORA51.10-201ENST00000384418 136 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 Y_RNA.500-201ENST00000384466 111 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 RPL30P4-201ENST00000429309 333 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 RPS4XP11-201ENST00000446897 772 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 RN7SL585P-201ENST00000470538 280 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 RPS27P22-201ENST00000478056 241 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 MIR3129-201ENST00000581095 76 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 MIR432-201ENST00000606207 94 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 JPX_2.1-201ENST00000614161 69 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 MIR2052-201ENST00000636055 55 ntBASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCRAQ6ISU1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 SNORD35B-201ENST00000363660 87 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 RNY4P6-201ENST00000363667 96 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 Y_RNA.220-201ENST00000364244 109 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 SNORD31B-201ENST00000364977 69 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 RNU6-1240P-201ENST00000365155 104 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 MIR128-1-201ENST00000384921 82 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 AC097463.2-201ENST00000421074 142 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 AC011604.1-201ENST00000545978 196 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 AL442128.1-201ENST00000615151 90 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 MIR6852-201ENST00000621699 66 ntBASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTCRAQ6ISU1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms