Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AC074290.1-201ENST00000448883 135 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 AC107222.1-201ENST00000510899 637 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 AC110588.1-201ENST00000559699 137 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 AC004467.1-201ENST00000615678 330 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 MIR7153-201ENST00000637758 57 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 AC010615.1-201ENST00000594254 1764 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 Y_RNA.188-201ENST00000363952 111 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 RNA5SP125-201ENST00000364843 120 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 Y_RNA.331-201ENST00000365267 102 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 RNU6-1203P-201ENST00000410703 110 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 AC003685.2-201ENST00000422795 395 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 AC092427.1-202ENST00000430569 476 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 UBBP3-201ENST00000445497 241 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 AC114982.1-201ENST00000469402 321 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 Y_RNA.668-201ENST00000516233 93 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 AC091932.3-201ENST00000624223 323 ntBASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.11□□□□□ -1.91
FNDC3BQ53EP0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 U3.8-201ENST00000363675 217 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 MIR586-201ENST00000385035 97 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 Y_RNA.581-201ENST00000391017 97 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 AL357139.1-201ENST00000407792 426 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 MIR1283-1-201ENST00000408494 87 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 RNA5SP504-201ENST00000410676 117 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 RNU6-1271P-201ENST00000517049 105 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 MIR3671-201ENST00000580455 88 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 MIR4423-201ENST00000580922 80 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 MIR1248-201ENST00000629190 106 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 MTND5P6-201ENST00000422338 1798 ntBASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FNDC3BQ53EP0 AL391987.6-201ENST00000305671 199 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 SNORD81.1-201ENST00000363064 77 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 SNORA67.2-201ENST00000384300 149 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 RNU6-102P-201ENST00000384485 104 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 RNU2-38P-201ENST00000410856 79 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 SNORD127-201ENST00000458892 86 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 RNU6-1132P-201ENST00000459214 107 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 AC010401.1-201ENST00000463867 348 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 SRIP1-201ENST00000489235 288 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 ATP5EP1-201ENST00000510257 156 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 RNU6-496P-201ENST00000516145 99 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 RNA5SP490-201ENST00000517141 136 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 DEFB108E-201ENST00000524692 240 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 AL109918.3-201ENST00000603072 338 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 AC006380.1-201ENST00000603598 186 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 MIR7106-201ENST00000612419 65 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 AC008873.1-201ENST00000625051 138 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
FNDC3BQ53EP0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
FNDC3BQ53EP0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.09□□□□□ -1.92
FNDC3BQ53EP0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 Y_RNA.541-201ENST00000384640 113 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 MIR548B-201ENST00000385247 97 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 SNORA53-201ENST00000391141 249 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 RPL32P35-201ENST00000415214 394 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 TOMM22P2-201ENST00000430735 237 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 AC104389.3-201ENST00000445629 235 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 AC005042.3-201ENST00000453230 174 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 RNA5SP217-201ENST00000515959 91 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 RNU6-1338P-201ENST00000516328 91 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 RNU6-155P-201ENST00000516347 100 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 RNU6-56P-201ENST00000516986 93 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 AC055872.1-201ENST00000570978 278 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 AC037487.3-201ENST00000606668 112 ntBASIC3.08□□□□□ -1.92
FNDC3BQ53EP0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms