Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 RNA5SP104-201ENST00000410989 118 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NFX1Q12986 HMGB1P37-201ENST00000439613 609 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 AL133547.1-201ENST00000448546 220 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 AL021707.8-201ENST00000609428 183 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 AL121772.2-201ENST00000614331 297 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.38□□□□□ -1.71
NFX1Q12986 AC012442.3-202ENST00000636742 206 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NFX1Q12986 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.38□□□□□ -1.71
NFX1Q12986 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.38□□□□□ -1.71
NFX1Q12986 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NFX1Q12986 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NFX1Q12986 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NFX1Q12986 AF117829.1-206ENST00000621883 3802 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.37□□□□□ -1.71
NFX1Q12986 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.37□□□□□ -1.71
NFX1Q12986 RNU1-72P-201ENST00000362976 153 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 RNU6-219P-201ENST00000364728 107 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NFX1Q12986 MIR320B2-201ENST00000408479 138 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 RN7SKP156-201ENST00000410308 342 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.37□□□□□ -1.71
NFX1Q12986 HMGN2P30-201ENST00000423237 256 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 AC012306.1-201ENST00000423267 114 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.37□□□□□ -1.71
NFX1Q12986 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 RPL26P9-201ENST00000457466 433 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.37□□□□□ -1.71
NFX1Q12986 AC097462.1-201ENST00000514125 324 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 RNU6-830P-201ENST00000516353 107 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 AL359198.2-201ENST00000611836 194 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 MIR6075-201ENST00000620782 95 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NFX1Q12986 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NFX1Q12986 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NFX1Q12986 ZNF962P-201ENST00000443465 3140 ntBASIC4.37□□□□□ -1.71
NFX1Q12986 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.37□□□□□ -1.71
NFX1Q12986 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.36□□□□□ -1.71
NFX1Q12986 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.36□□□□□ -1.71
NFX1Q12986 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NFX1Q12986 RNA5SP124-201ENST00000362739 110 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 SNORD56.1-201ENST00000362913 68 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 RNU6-1141P-201ENST00000364520 107 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 MIR544A-201ENST00000384855 91 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 MIR759-201ENST00000390224 91 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 RNU6-644P-201ENST00000391155 98 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 Y_RNA.601-201ENST00000410500 113 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 SNORA57.3-201ENST00000411095 141 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.36□□□□□ -1.71
NFX1Q12986 EIF4EP4-201ENST00000424916 578 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 AC069285.2-201ENST00000440210 275 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 RNU1-103P-201ENST00000516502 125 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.36□□□□□ -1.71
NFX1Q12986 CYCSP30-201ENST00000546447 172 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.36□□□□□ -1.71
NFX1Q12986 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.36□□□□□ -1.71
NFX1Q12986 AL049861.1-201ENST00000603130 150 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 AC024220.1-201ENST00000603675 484 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 AP003357.1-201ENST00000604497 148 ntBASIC4.36□□□□□ -1.71
NFX1Q12986 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.36□□□□□ -1.71
NFX1Q12986 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NFX1Q12986 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NFX1Q12986 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.35□□□□□ -1.71
NFX1Q12986 AC073073.2-201ENST00000609827 2578 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 RNU6-1229P-201ENST00000364295 107 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 RNU4-41P-201ENST00000364426 143 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 RNA5SP97-201ENST00000365006 84 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 Y_RNA.344-201ENST00000365381 112 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 RNU6-487P-201ENST00000365430 104 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 SNORD6-201ENST00000365444 73 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 DYNLT3P1-201ENST00000378574 347 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 AC096949.1-201ENST00000412047 152 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 AC007969.2-201ENST00000441891 191 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 RPL37P4-201ENST00000448908 268 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 AL451050.1-201ENST00000450126 415 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 AC011406.1-201ENST00000512440 370 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 RNU6-703P-201ENST00000516946 107 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 AC011602.1-201ENST00000546484 331 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 AL365205.2-201ENST00000594586 68 ntBASIC4.35□□□□□ -1.71
NFX1Q12986 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NFX1Q12986 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NFX1Q12986 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NFX1Q12986 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NFX1Q12986 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
NFX1Q12986 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NFX1Q12986 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NFX1Q12986 AC103988.1-201ENST00000566382 2177 ntBASIC4.34□□□□□ -1.71
NFX1Q12986 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NFX1Q12986 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.34□□□□□ -1.71
NFX1Q12986 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NFX1Q12986 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
NFX1Q12986 RNU6-884P-201ENST00000363889 107 ntBASIC4.34□□□□□ -1.71
NFX1Q12986 RNA5SP399-201ENST00000364003 117 ntBASIC4.34□□□□□ -1.71
NFX1Q12986 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.34□□□□□ -1.71
NFX1Q12986 AC004552.1-201ENST00000419089 348 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms