Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXC1Q12948 RNU1-95P-201ENST00000516357 160 ntBASIC4.05□□□□□ -1.76
FOXC1Q12948 RNU1-128P-201ENST00000516704 160 ntBASIC4.05□□□□□ -1.76
FOXC1Q12948 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXC1Q12948 AC005000.2-201ENST00000605468 310 ntBASIC4.05□□□□□ -1.76
FOXC1Q12948 AC006160.2-201ENST00000637708 154 ntBASIC4.05□□□□□ -1.76
FOXC1Q12948 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXC1Q12948 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXC1Q12948 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXC1Q12948 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXC1Q12948 Z82217.1-201ENST00000625157 8149 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXC1Q12948 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXC1Q12948 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXC1Q12948 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXC1Q12948 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXC1Q12948 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.04□□□□□ -1.76
FOXC1Q12948 SNORA5A-201ENST00000384111 134 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 RNU1-57P-201ENST00000384491 166 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 Y_RNA.531-201ENST00000384589 121 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 U8.17-201ENST00000391292 132 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 MRPL35P3-201ENST00000421557 364 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 ABCF2P2-201ENST00000450549 296 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXC1Q12948 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXC1Q12948 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXC1Q12948 HIGD1AP1-201ENST00000550979 275 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
FOXC1Q12948 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.04□□□□□ -1.76
FOXC1Q12948 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
FOXC1Q12948 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXC1Q12948 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXC1Q12948 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXC1Q12948 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXC1Q12948 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
FOXC1Q12948 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXC1Q12948 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
FOXC1Q12948 AC092376.2-201ENST00000622621 4116 ntBASIC4.03□□□□□ -1.76
FOXC1Q12948 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXC1Q12948 RNU1-83P-201ENST00000363426 164 ntBASIC4.03□□□□□ -1.76
FOXC1Q12948 RNU6-60P-201ENST00000364792 103 ntBASIC4.03□□□□□ -1.76
FOXC1Q12948 MIR30B-201ENST00000384850 88 ntBASIC4.03□□□□□ -1.76
FOXC1Q12948 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXC1Q12948 AC023141.12-201ENST00000512399 199 ntBASIC4.03□□□□□ -1.76
FOXC1Q12948 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXC1Q12948 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXC1Q12948 CYCSP40-201ENST00000575927 294 ntBASIC4.03□□□□□ -1.76
FOXC1Q12948 AC087741.2-201ENST00000619415 172 ntBASIC4.03□□□□□ -1.76
FOXC1Q12948 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXC1Q12948 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXC1Q12948 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXC1Q12948 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXC1Q12948 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXC1Q12948 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXC1Q12948 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXC1Q12948 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXC1Q12948 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXC1Q12948 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
FOXC1Q12948 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
FOXC1Q12948 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXC1Q12948 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 Y_RNA.360-201ENST00000365512 102 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 Y_RNA.410-201ENST00000383992 113 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 Y_RNA.454-201ENST00000384224 113 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 RPS29P4-201ENST00000414733 161 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.02□□□□□ -1.77
FOXC1Q12948 SNRPGP10-201ENST00000432323 225 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 RPL35AP21-201ENST00000437667 333 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 RNU7-14P-201ENST00000459331 62 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXC1Q12948 RNA5SP73-201ENST00000516744 108 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 MIR4305-201ENST00000583252 102 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 YPEL5P2-201ENST00000605553 359 ntBASIC4.02□□□□□ -1.77
FOXC1Q12948 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXC1Q12948 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
FOXC1Q12948 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.02□□□□□ -1.77
FOXC1Q12948 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.02□□□□□ -1.77
FOXC1Q12948 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXC1Q12948 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXC1Q12948 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXC1Q12948 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXC1Q12948 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
FOXC1Q12948 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXC1Q12948 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXC1Q12948 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
FOXC1Q12948 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXC1Q12948 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXC1Q12948 MFSD8-236ENST00000641509 4050 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 RNU1-20P-201ENST00000363314 162 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 SNORA2.2-201ENST00000365473 135 ntBASIC4.01□□□□□ -1.77
FOXC1Q12948 RNU6-652P-201ENST00000365488 107 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms