Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RPL30P11-203ENST00000598995 310 ntBASIC2.88□□□□□ -1.95
SLC6A4P31645 SNORD113-5-201ENST00000607261 78 ntBASIC2.88□□□□□ -1.95
SLC6A4P31645 AC004832.5-201ENST00000608677 401 ntBASIC2.88□□□□□ -1.95
SLC6A4P31645 MIR6715A-201ENST00000615929 79 ntBASIC2.88□□□□□ -1.95
SLC6A4P31645 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A4P31645 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A4P31645 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A4P31645 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A4P31645 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SLC6A4P31645 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SLC6A4P31645 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SLC6A4P31645 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC6A4P31645 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
SLC6A4P31645 RNU4-90P-201ENST00000362773 141 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 SNORD113-8-201ENST00000363497 74 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC6A4P31645 Y_RNA.447-201ENST00000384184 113 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 RNU6-937P-201ENST00000384325 106 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 MIR181A2-201ENST00000384863 110 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 AL138827.1-201ENST00000402666 306 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 MIR548H3-201ENST00000408771 118 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC6A4P31645 OOSP1P1-201ENST00000423265 274 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 AL445305.1-201ENST00000432577 575 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 RPS29P6-201ENST00000438196 145 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 RPL23AP58-201ENST00000440453 469 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 UQCRBP2-201ENST00000447827 297 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 AC108938.1-201ENST00000451204 136 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 AC003982.1-202ENST00000469928 248 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC6A4P31645 SEPT14P8-201ENST00000508026 178 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 RNU6-344P-201ENST00000516635 111 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 AC090115.4-201ENST00000609970 188 ntBASIC2.87□□□□□ -1.95
SLC6A4P31645 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SLC6A4P31645 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SLC6A4P31645 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SLC6A4P31645 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SLC6A4P31645 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 snoU2_19.1-201ENST00000362361 80 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 snoU2_19.2-201ENST00000363024 80 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 RNU6-1318P-201ENST00000365389 103 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 RNA5SP184-201ENST00000411071 108 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 RNA5SP344-201ENST00000411081 104 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC6A4P31645 IFNA11P-201ENST00000446352 526 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 AC091179.3-201ENST00000474761 144 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 AC098869.1-201ENST00000481627 292 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC6A4P31645 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC6A4P31645 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.86□□□□□ -1.95
SLC6A4P31645 MIR4319-201ENST00000577285 85 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 AC011373.1-201ENST00000607270 237 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 SDR42E1P4-201ENST00000620894 481 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC6A4P31645 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC6A4P31645 AC092435.3-201ENST00000565538 3654 ntBASIC2.86□□□□□ -1.95
SLC6A4P31645 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.86□□□□□ -1.95
SLC6A4P31645 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SLC6A4P31645 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SLC6A4P31645 MTND5P6-201ENST00000422338 1798 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SLC6A4P31645 RNU6-626P-201ENST00000363354 107 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 RNU6-379P-201ENST00000363813 104 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 U6atac.2-201ENST00000408644 118 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 RNU2-38P-201ENST00000410856 79 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 AL451074.5-201ENST00000415894 435 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC6A4P31645 AC009237.7-201ENST00000447357 229 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 MTND4LP30-201ENST00000454092 297 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC6A4P31645 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC6A4P31645 AP001282.2-201ENST00000616149 309 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 AL136360.1-201ENST00000503377 1900 ntBASIC2.85□□□□□ -1.95
SLC6A4P31645 FAM35CP-201ENST00000554755 2470 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 AL391987.6-201ENST00000305671 199 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 AC062016.1-201ENST00000355719 319 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 SNORA68.1-201ENST00000364537 132 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 RNU6-290P-201ENST00000365212 101 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 SNORD21-201ENST00000383953 95 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 RNU6-20P-201ENST00000384106 107 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 RNU6-1310P-201ENST00000384153 107 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 Y_RNA.498-201ENST00000384460 102 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 Y_RNA.552-201ENST00000384665 112 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 RNU6-21P-201ENST00000384710 107 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 Y_RNA.570-201ENST00000384750 101 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 RNU2-52P-201ENST00000410680 190 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC6A4P31645 AC027124.2-201ENST00000428249 105 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 AC004386.2-201ENST00000441858 148 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 RNU6-625P-201ENST00000459412 107 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC6A4P31645 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC6A4P31645 RNU6-1023P-201ENST00000516137 106 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 RNU6-496P-201ENST00000516145 99 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 SCARNA3-201ENST00000517097 143 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 AC018448.1-201ENST00000552843 316 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC6A4P31645 ZNF861P-201ENST00000588126 639 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 AC005176.2-201ENST00000596933 147 ntBASIC2.84□□□□□ -1.95
SLC6A4P31645 MZT1P2-201ENST00000604387 248 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms