Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 RN7SL283P-201ENST00000489055 303 ntBASIC2.63□□□□□ -1.99
PF4V1P10720 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.63□□□□□ -1.99
PF4V1P10720 RNU6-327P-201ENST00000516270 127 ntBASIC2.63□□□□□ -1.99
PF4V1P10720 MIR4446-201ENST00000578505 67 ntBASIC2.63□□□□□ -1.99
PF4V1P10720 RPL12P50-201ENST00000603116 116 ntBASIC2.63□□□□□ -1.99
PF4V1P10720 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.63□□□□□ -1.99
PF4V1P10720 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.63□□□□□ -1.99
PF4V1P10720 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.63□□□□□ -1.99
PF4V1P10720 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
PF4V1P10720 RNU1-58P-201ENST00000362413 163 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 RN7SKP111-201ENST00000410349 271 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 DPH3P2-201ENST00000422618 250 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.62□□□□□ -1.99
PF4V1P10720 AL118496.2-201ENST00000448300 230 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 AL109933.2-201ENST00000452651 260 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 MTND5P22-201ENST00000458380 195 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 CENPBD1P1-201ENST00000464061 469 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 SNORA40.15-201ENST00000516884 107 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 MIR4423-201ENST00000580922 80 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 AC008737.2-201ENST00000599446 118 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 AC116312.1-201ENST00000606841 314 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 MIR7112-201ENST00000616126 65 ntBASIC2.62□□□□□ -1.99
PF4V1P10720 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
PF4V1P10720 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.62□□□□□ -1.99
PF4V1P10720 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PF4V1P10720 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PF4V1P10720 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.61□□□□□ -1.99
PF4V1P10720 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PF4V1P10720 RNU6-1266P-201ENST00000362794 105 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 RNU6-23P-201ENST00000363283 107 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 Y_RNA.210-201ENST00000364161 110 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 SNORD114-6-201ENST00000364393 72 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 SNORD63-201ENST00000384262 68 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 RNU5A-5P-201ENST00000411054 116 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 MTND2P23-201ENST00000422990 651 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.61□□□□□ -1.99
PF4V1P10720 AL353689.1-201ENST00000438895 199 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.61□□□□□ -1.99
PF4V1P10720 RPS4XP2-201ENST00000458402 793 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 AC010655.3-201ENST00000478818 450 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 RNU6-1143P-201ENST00000516125 104 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 RNU6-397P-201ENST00000516226 104 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 RNU6-1045P-201ENST00000516321 107 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 RNU6-897P-201ENST00000517135 105 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 AP002001.1-203ENST00000534002 267 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.61□□□□□ -1.99
PF4V1P10720 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.61□□□□□ -1.99
PF4V1P10720 AL590240.4-201ENST00000616908 390 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 MIR8057-201ENST00000620957 69 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 SCARNA15.3-201ENST00000626315 122 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 SCARNA4.1-201ENST00000628597 123 ntBASIC2.61□□□□□ -1.99
PF4V1P10720 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PF4V1P10720 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PF4V1P10720 RNA5SP493-201ENST00000364115 91 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 SNORA67.1-201ENST00000364749 141 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 MIR518A2-201ENST00000384966 87 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 SNORA48.2-201ENST00000390926 124 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 RNA5SP465-201ENST00000391195 109 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.6□□□□□ -1.99
PF4V1P10720 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.6□□□□□ -1.99
PF4V1P10720 AC025750.2-201ENST00000442609 450 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.6□□□□□ -1.99
PF4V1P10720 AP001486.1-201ENST00000463339 476 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.6□□□□□ -1.99
PF4V1P10720 RN7SL636P-201ENST00000497504 294 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 MRPS35P2-201ENST00000508242 191 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 AC025647.1-201ENST00000517879 253 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 AC004467.1-201ENST00000615678 330 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 AL159152.1-201ENST00000635019 2587 ntBASIC2.6□□□□□ -1.99
PF4V1P10720 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
PF4V1P10720 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PF4V1P10720 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.59□□□□□ -1.99
PF4V1P10720 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PF4V1P10720 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PF4V1P10720 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PF4V1P10720 Y_RNA.143-201ENST00000363520 106 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 Y_RNA.570-201ENST00000384750 101 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 SNORA48.5-201ENST00000391143 135 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 SUMO1P2-201ENST00000452524 304 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 AC107222.1-201ENST00000510899 637 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 AC009127.3-201ENST00000570531 403 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 MIR3169-201ENST00000578032 83 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 AC136443.5-201ENST00000603741 370 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 AC073657.2-201ENST00000605661 303 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 uc_338.1-201ENST00000612113 180 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 AC091932.3-201ENST00000624223 323 ntBASIC2.59□□□□□ -1.99
PF4V1P10720 ZNF271P-202ENST00000465539 1970 ntBASIC2.59□□□□□ -2
PF4V1P10720 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
PF4V1P10720 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.59□□□□□ -2
PF4V1P10720 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
PF4V1P10720 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
PF4V1P10720 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PF4V1P10720 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
PF4V1P10720 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
PF4V1P10720 RNU6-1240P-201ENST00000365155 104 ntBASIC2.58□□□□□ -2
PF4V1P10720 BX510359.4-201ENST00000423750 193 ntBASIC2.58□□□□□ -2
PF4V1P10720 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms