Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MIR5006-201ENST00000583027 110 ntBASIC1.16□□□□□ -2.22
CD74P04233 AP000907.4-201ENST00000604143 237 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC080013.6-201ENST00000606185 215 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC104458.1-201ENST00000608243 463 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC099654.12-201ENST00000639868 649 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.16□□□□□ -2.22
CD74P04233 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CD74P04233 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
CD74P04233 RNU6-254P-201ENST00000363377 107 ntBASIC1.15□□□□□ -2.23
CD74P04233 Y_RNA.151-201ENST00000363566 112 ntBASIC1.15□□□□□ -2.23
CD74P04233 RNU4-13P-201ENST00000364019 141 ntBASIC1.15□□□□□ -2.23
CD74P04233 MIR487A-201ENST00000385009 80 ntBASIC1.15□□□□□ -2.23
CD74P04233 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CD74P04233 RNU6-332P-201ENST00000391193 108 ntBASIC1.15□□□□□ -2.23
CD74P04233 RNU6-908P-201ENST00000410160 94 ntBASIC1.15□□□□□ -2.23
CD74P04233 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.15□□□□□ -2.23
CD74P04233 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CD74P04233 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.15□□□□□ -2.23
CD74P04233 SNRPGP13-201ENST00000442212 177 ntBASIC1.15□□□□□ -2.23
CD74P04233 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.15□□□□□ -2.23
CD74P04233 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.15□□□□□ -2.23
CD74P04233 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CD74P04233 AC099513.1-201ENST00000490423 301 ntBASIC1.15□□□□□ -2.23
CD74P04233 AF186996.7-201ENST00000492781 209 ntBASIC1.15□□□□□ -2.23
CD74P04233 RNU6-1053P-201ENST00000515930 101 ntBASIC1.15□□□□□ -2.23
CD74P04233 RNU6-1041P-201ENST00000516254 102 ntBASIC1.15□□□□□ -2.23
CD74P04233 RNU6-902P-201ENST00000517212 91 ntBASIC1.15□□□□□ -2.23
CD74P04233 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.15□□□□□ -2.23
CD74P04233 CPDP1-201ENST00000579660 283 ntBASIC1.15□□□□□ -2.23
CD74P04233 FGF7P1-201ENST00000582820 288 ntBASIC1.15□□□□□ -2.23
CD74P04233 AC012557.2-201ENST00000605919 418 ntBASIC1.15□□□□□ -2.23
CD74P04233 MIR8076-201ENST00000611401 83 ntBASIC1.15□□□□□ -2.23
CD74P04233 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.15□□□□□ -2.23
CD74P04233 AC005562.2-201ENST00000618264 111 ntBASIC1.15□□□□□ -2.23
CD74P04233 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CD74P04233 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CD74P04233 Y_RNA.4-201ENST00000362333 112 ntBASIC1.14□□□□□ -2.23
CD74P04233 RNU6-862P-201ENST00000362804 105 ntBASIC1.14□□□□□ -2.23
CD74P04233 RNU6-414P-201ENST00000363705 104 ntBASIC1.14□□□□□ -2.23
CD74P04233 RNU4-62P-201ENST00000410125 130 ntBASIC1.14□□□□□ -2.23
CD74P04233 AP1B1P2-201ENST00000416196 106 ntBASIC1.14□□□□□ -2.23
CD74P04233 BTF3P4-201ENST00000418852 495 ntBASIC1.14□□□□□ -2.23
CD74P04233 AL590632.1-201ENST00000424289 371 ntBASIC1.14□□□□□ -2.23
CD74P04233 MTCO1P20-201ENST00000425366 358 ntBASIC1.14□□□□□ -2.23
CD74P04233 CST2P1-201ENST00000425770 87 ntBASIC1.14□□□□□ -2.23
CD74P04233 NDUFA5P4-201ENST00000436704 385 ntBASIC1.14□□□□□ -2.23
CD74P04233 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.14□□□□□ -2.23
CD74P04233 MTCO2P7-201ENST00000446518 666 ntBASIC1.14□□□□□ -2.23
CD74P04233 AC016717.1-201ENST00000448918 286 ntBASIC1.14□□□□□ -2.23
CD74P04233 AC007395.1-201ENST00000451333 677 ntBASIC1.14□□□□□ -2.23
CD74P04233 ATP5J2P3-201ENST00000451550 258 ntBASIC1.14□□□□□ -2.23
CD74P04233 MTCO3P8-201ENST00000453691 755 ntBASIC1.14□□□□□ -2.23
CD74P04233 snoU13.30-201ENST00000458951 104 ntBASIC1.14□□□□□ -2.23
CD74P04233 AC087477.1-201ENST00000465747 340 ntBASIC1.14□□□□□ -2.23
CD74P04233 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.14□□□□□ -2.23
CD74P04233 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.14□□□□□ -2.23
CD74P04233 MTND1P35-201ENST00000526739 508 ntBASIC1.14□□□□□ -2.23
CD74P04233 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.14□□□□□ -2.23
CD74P04233 DNAJC19P9-201ENST00000555084 351 ntBASIC1.14□□□□□ -2.23
CD74P04233 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.14□□□□□ -2.23
CD74P04233 SUB1P4-201ENST00000566062 339 ntBASIC1.14□□□□□ -2.23
CD74P04233 MIR4303-201ENST00000581299 66 ntBASIC1.14□□□□□ -2.23
CD74P04233 AC100830.2-201ENST00000581636 240 ntBASIC1.14□□□□□ -2.23
CD74P04233 MIR4753-201ENST00000585119 83 ntBASIC1.14□□□□□ -2.23
CD74P04233 AC023043.2-201ENST00000589678 1026 ntBASIC1.14□□□□□ -2.23
CD74P04233 RPL17P51-201ENST00000605218 238 ntBASIC1.14□□□□□ -2.23
CD74P04233 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.14□□□□□ -2.23
CD74P04233 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CD74P04233 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
CD74P04233 RNU6-562P-201ENST00000362731 107 ntBASIC1.13□□□□□ -2.23
CD74P04233 RNU6-451P-201ENST00000362921 107 ntBASIC1.13□□□□□ -2.23
CD74P04233 SNORD113-7-201ENST00000363762 77 ntBASIC1.13□□□□□ -2.23
CD74P04233 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CD74P04233 SNORA67.6-201ENST00000391093 99 ntBASIC1.13□□□□□ -2.23
CD74P04233 FGF7P8-201ENST00000402994 292 ntBASIC1.13□□□□□ -2.23
CD74P04233 AL513185.2-201ENST00000425543 193 ntBASIC1.13□□□□□ -2.23
CD74P04233 AL589823.1-201ENST00000429577 183 ntBASIC1.13□□□□□ -2.23
CD74P04233 C8orf59P1-201ENST00000429930 303 ntBASIC1.13□□□□□ -2.23
CD74P04233 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.13□□□□□ -2.23
CD74P04233 AL353572.1-201ENST00000442490 417 ntBASIC1.13□□□□□ -2.23
CD74P04233 RPS29P29-201ENST00000456396 171 ntBASIC1.13□□□□□ -2.23
CD74P04233 HMGN1P13-201ENST00000505795 138 ntBASIC1.13□□□□□ -2.23
CD74P04233 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.13□□□□□ -2.23
CD74P04233 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.13□□□□□ -2.23
CD74P04233 AC016957.1-201ENST00000534895 309 ntBASIC1.13□□□□□ -2.23
CD74P04233 AC016256.1-201ENST00000547971 354 ntBASIC1.13□□□□□ -2.23
CD74P04233 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.13□□□□□ -2.23
CD74P04233 SNORD53B-201ENST00000577887 78 ntBASIC1.13□□□□□ -2.23
CD74P04233 AL512598.1-201ENST00000610158 273 ntBASIC1.13□□□□□ -2.23
CD74P04233 AC015540.1-201ENST00000615828 501 ntBASIC1.13□□□□□ -2.23
CD74P04233 AL121890.5-201ENST00000620848 304 ntBASIC1.13□□□□□ -2.23
CD74P04233 MIR1321-201ENST00000637766 79 ntBASIC1.13□□□□□ -2.23
CD74P04233 MTND5P9-201ENST00000503854 1755 ntBASIC1.13□□□□□ -2.23
CD74P04233 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.13□□□□□ -2.23
CD74P04233 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CD74P04233 RNU6-112P-201ENST00000363599 104 ntBASIC1.12□□□□□ -2.23
CD74P04233 RNY3P3-201ENST00000363816 102 ntBASIC1.12□□□□□ -2.23
CD74P04233 RNU1-96P-201ENST00000364163 162 ntBASIC1.12□□□□□ -2.23
CD74P04233 Y_RNA.256-201ENST00000364594 104 ntBASIC1.12□□□□□ -2.23
CD74P04233 RNU6-203P-201ENST00000384038 104 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms