Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 Y_RNA.706-201ENST00000516933 99 ntBASIC1.87□□□□□ -2.11
SNX3O60493 AC134698.4-201ENST00000523451 826 ntBASIC1.87□□□□□ -2.11
SNX3O60493 AP000889.1-201ENST00000530968 660 ntBASIC1.87□□□□□ -2.11
SNX3O60493 APOOP3-201ENST00000536787 586 ntBASIC1.87□□□□□ -2.11
SNX3O60493 AC092794.2-201ENST00000620933 563 ntBASIC1.87□□□□□ -2.11
SNX3O60493 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SNX3O60493 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNX3O60493 Y_RNA.132-201ENST00000363421 102 ntBASIC1.86□□□□□ -2.11
SNX3O60493 RNU6-137P-201ENST00000363680 108 ntBASIC1.86□□□□□ -2.11
SNX3O60493 RNU6-1188P-201ENST00000363795 107 ntBASIC1.86□□□□□ -2.11
SNX3O60493 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
SNX3O60493 RNU6-245P-201ENST00000384020 107 ntBASIC1.86□□□□□ -2.11
SNX3O60493 RNU6-418P-201ENST00000384035 107 ntBASIC1.86□□□□□ -2.11
SNX3O60493 RNU6-159P-201ENST00000391080 106 ntBASIC1.86□□□□□ -2.11
SNX3O60493 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX3O60493 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.86□□□□□ -2.11
SNX3O60493 MTND5P20-201ENST00000448677 143 ntBASIC1.86□□□□□ -2.11
SNX3O60493 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.86□□□□□ -2.11
SNX3O60493 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.86□□□□□ -2.11
SNX3O60493 RNU6-559P-201ENST00000516151 98 ntBASIC1.86□□□□□ -2.11
SNX3O60493 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.86□□□□□ -2.11
SNX3O60493 SNORA25.14-201ENST00000516481 132 ntBASIC1.86□□□□□ -2.11
SNX3O60493 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX3O60493 AC005899.2-201ENST00000584353 90 ntBASIC1.86□□□□□ -2.11
SNX3O60493 AC078899.2-201ENST00000595282 212 ntBASIC1.86□□□□□ -2.11
SNX3O60493 AC100812.1-201ENST00000607622 580 ntBASIC1.86□□□□□ -2.11
SNX3O60493 AL132765.2-201ENST00000610812 351 ntBASIC1.86□□□□□ -2.11
SNX3O60493 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
SNX3O60493 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.86□□□□□ -2.11
SNX3O60493 RNA5SP289-201ENST00000362332 137 ntBASIC1.85□□□□□ -2.11
SNX3O60493 RNU6-222P-201ENST00000362438 107 ntBASIC1.85□□□□□ -2.11
SNX3O60493 Y_RNA.106-201ENST00000363189 100 ntBASIC1.85□□□□□ -2.11
SNX3O60493 SNORA67.2-201ENST00000384300 149 ntBASIC1.85□□□□□ -2.11
SNX3O60493 RNU6-310P-201ENST00000384655 107 ntBASIC1.85□□□□□ -2.11
SNX3O60493 Y_RNA.646-201ENST00000410980 101 ntBASIC1.85□□□□□ -2.11
SNX3O60493 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SNX3O60493 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.85□□□□□ -2.11
SNX3O60493 RNU1-131P-201ENST00000458943 161 ntBASIC1.85□□□□□ -2.11
SNX3O60493 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
SNX3O60493 FRG2DP-202ENST00000566967 323 ntBASIC1.85□□□□□ -2.11
SNX3O60493 MIR4753-201ENST00000585119 83 ntBASIC1.85□□□□□ -2.11
SNX3O60493 AC104260.1-201ENST00000616660 539 ntBASIC1.85□□□□□ -2.11
SNX3O60493 AC245060.5-201ENST00000610778 3293 ntBASIC1.85□□□□□ -2.11
SNX3O60493 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SNX3O60493 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SNX3O60493 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SNX3O60493 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.84□□□□□ -2.11
SNX3O60493 RNU6-874P-201ENST00000362390 105 ntBASIC1.84□□□□□ -2.11
SNX3O60493 RNU6-1305P-201ENST00000364353 104 ntBASIC1.84□□□□□ -2.11
SNX3O60493 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.84□□□□□ -2.11
SNX3O60493 MIR10B-201ENST00000385011 110 ntBASIC1.84□□□□□ -2.11
SNX3O60493 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
SNX3O60493 RNU6-700P-201ENST00000391043 107 ntBASIC1.84□□□□□ -2.11
SNX3O60493 RNU2-20P-201ENST00000410425 191 ntBASIC1.84□□□□□ -2.11
SNX3O60493 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.84□□□□□ -2.11
SNX3O60493 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.84□□□□□ -2.11
SNX3O60493 RPL23AP50-201ENST00000434149 455 ntBASIC1.84□□□□□ -2.11
SNX3O60493 MTND2P29-201ENST00000438595 412 ntBASIC1.84□□□□□ -2.11
SNX3O60493 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.84□□□□□ -2.11
SNX3O60493 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
SNX3O60493 HMGN2P9-201ENST00000476875 229 ntBASIC1.84□□□□□ -2.11
SNX3O60493 AC097473.1-201ENST00000508142 408 ntBASIC1.84□□□□□ -2.11
SNX3O60493 AC008549.1-201ENST00000512900 643 ntBASIC1.84□□□□□ -2.11
SNX3O60493 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.84□□□□□ -2.11
SNX3O60493 RNU6-120P-201ENST00000516077 103 ntBASIC1.84□□□□□ -2.11
SNX3O60493 RNU6-344P-201ENST00000516635 111 ntBASIC1.84□□□□□ -2.11
SNX3O60493 RNU6-307P-201ENST00000516743 106 ntBASIC1.84□□□□□ -2.11
SNX3O60493 Y_RNA.702-201ENST00000516843 96 ntBASIC1.84□□□□□ -2.11
SNX3O60493 RNU1-117P-201ENST00000517041 158 ntBASIC1.84□□□□□ -2.11
SNX3O60493 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.84□□□□□ -2.11
SNX3O60493 MIR5690-201ENST00000583739 73 ntBASIC1.84□□□□□ -2.11
SNX3O60493 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.84□□□□□ -2.11
SNX3O60493 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.84□□□□□ -2.11
SNX3O60493 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.84□□□□□ -2.11
SNX3O60493 AC243829.7-201ENST00000633081 225 ntBASIC1.84□□□□□ -2.11
SNX3O60493 MIR1302-1-201ENST00000637932 143 ntBASIC1.84□□□□□ -2.11
SNX3O60493 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SNX3O60493 MIR586-201ENST00000385035 97 ntBASIC1.83□□□□□ -2.12
SNX3O60493 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SNX3O60493 RNU6-1009P-201ENST00000390996 107 ntBASIC1.83□□□□□ -2.12
SNX3O60493 MIR190B-201ENST00000401119 79 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AL023284.1-201ENST00000403956 276 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AL033519.2-201ENST00000403958 392 ntBASIC1.83□□□□□ -2.12
SNX3O60493 RNA5SP504-201ENST00000410676 117 ntBASIC1.83□□□□□ -2.12
SNX3O60493 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.83□□□□□ -2.12
SNX3O60493 USP9YP16-201ENST00000430287 407 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.83□□□□□ -2.12
SNX3O60493 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.83□□□□□ -2.12
SNX3O60493 AC016717.1-201ENST00000448918 286 ntBASIC1.83□□□□□ -2.12
SNX3O60493 RPL23AP3-201ENST00000453844 468 ntBASIC1.83□□□□□ -2.12
SNX3O60493 USP9YP23-201ENST00000455085 407 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AP001486.1-201ENST00000463339 476 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AL049873.1-201ENST00000480540 376 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.83□□□□□ -2.12
SNX3O60493 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
SNX3O60493 MIR5695-201ENST00000579717 85 ntBASIC1.83□□□□□ -2.12
SNX3O60493 CYP2C61P-201ENST00000604072 290 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AL359697.1-201ENST00000624879 587 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms