Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.21□□□□□ -1.9
SHOXO15266 RN7SKP21-201ENST00000516503 220 ntBASIC3.21□□□□□ -1.9
SHOXO15266 SCARNA3-201ENST00000517097 143 ntBASIC3.21□□□□□ -1.9
SHOXO15266 AP003730.1-201ENST00000524605 285 ntBASIC3.21□□□□□ -1.9
SHOXO15266 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.21□□□□□ -1.9
SHOXO15266 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.21□□□□□ -1.9
SHOXO15266 AC007224.1-201ENST00000564410 144 ntBASIC3.21□□□□□ -1.9
SHOXO15266 AC105245.1-201ENST00000581934 244 ntBASIC3.21□□□□□ -1.9
SHOXO15266 MIR3138-201ENST00000585238 82 ntBASIC3.21□□□□□ -1.9
SHOXO15266 VN1R85P-201ENST00000601587 426 ntBASIC3.21□□□□□ -1.9
SHOXO15266 AC004832.4-201ENST00000608952 331 ntBASIC3.21□□□□□ -1.9
SHOXO15266 MIR6868-201ENST00000611215 58 ntBASIC3.21□□□□□ -1.9
SHOXO15266 AC103988.1-201ENST00000566382 2177 ntBASIC3.21□□□□□ -1.9
SHOXO15266 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.2□□□□□ -1.9
SHOXO15266 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHOXO15266 RNU6-275P-201ENST00000364910 107 ntBASIC3.2□□□□□ -1.9
SHOXO15266 RNU6-449P-201ENST00000383914 107 ntBASIC3.2□□□□□ -1.9
SHOXO15266 Y_RNA.412-201ENST00000384001 104 ntBASIC3.2□□□□□ -1.9
SHOXO15266 MIR526A2-201ENST00000390198 65 ntBASIC3.2□□□□□ -1.9
SHOXO15266 AL139095.1-201ENST00000404326 391 ntBASIC3.2□□□□□ -1.9
SHOXO15266 RN7SKP123-201ENST00000410732 291 ntBASIC3.2□□□□□ -1.9
SHOXO15266 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.2□□□□□ -1.9
SHOXO15266 EBAG9P1-201ENST00000418955 543 ntBASIC3.2□□□□□ -1.9
SHOXO15266 RPL30P4-201ENST00000429309 333 ntBASIC3.2□□□□□ -1.9
SHOXO15266 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.2□□□□□ -1.9
SHOXO15266 HSPE1P13-201ENST00000451143 297 ntBASIC3.2□□□□□ -1.9
SHOXO15266 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.2□□□□□ -1.9
SHOXO15266 AC021269.2-201ENST00000532318 330 ntBASIC3.2□□□□□ -1.9
SHOXO15266 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.2□□□□□ -1.9
SHOXO15266 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SHOXO15266 AL713866.2-201ENST00000603579 219 ntBASIC3.2□□□□□ -1.9
SHOXO15266 AC069294.1-201ENST00000608397 350 ntBASIC3.2□□□□□ -1.9
SHOXO15266 AC004832.5-201ENST00000608677 401 ntBASIC3.2□□□□□ -1.9
SHOXO15266 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SHOXO15266 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHOXO15266 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.2□□□□□ -1.9
SHOXO15266 AL445567.2-201ENST00000618935 498 ntBASIC3.2□□□□□ -1.9
SHOXO15266 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHOXO15266 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
SHOXO15266 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SHOXO15266 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
SHOXO15266 RNU6-944P-201ENST00000364023 107 ntBASIC3.19□□□□□ -1.9
SHOXO15266 SNORA62.3-201ENST00000365110 153 ntBASIC3.19□□□□□ -1.9
SHOXO15266 RNU6-144P-201ENST00000383951 107 ntBASIC3.19□□□□□ -1.9
SHOXO15266 SNORD116-18-201ENST00000383961 92 ntBASIC3.19□□□□□ -1.9
SHOXO15266 RNU6-975P-201ENST00000384296 105 ntBASIC3.19□□□□□ -1.9
SHOXO15266 MIR626-201ENST00000385032 94 ntBASIC3.19□□□□□ -1.9
SHOXO15266 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SHOXO15266 SNORA48.5-201ENST00000391143 135 ntBASIC3.19□□□□□ -1.9
SHOXO15266 RNU5E-9P-201ENST00000411164 104 ntBASIC3.19□□□□□ -1.9
SHOXO15266 RPL23AP7-203ENST00000449021 469 ntBASIC3.19□□□□□ -1.9
SHOXO15266 CYP2C59P-201ENST00000457790 269 ntBASIC3.19□□□□□ -1.9
SHOXO15266 RNU6-221P-201ENST00000459541 99 ntBASIC3.19□□□□□ -1.9
SHOXO15266 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
SHOXO15266 TRBV12-2-201ENST00000489763 344 ntBASIC3.19□□□□□ -1.9
SHOXO15266 MIR449C-201ENST00000516047 92 ntBASIC3.19□□□□□ -1.9
SHOXO15266 MTND5P41-201ENST00000517498 206 ntBASIC3.19□□□□□ -1.9
SHOXO15266 MRPL49P2-201ENST00000521066 465 ntBASIC3.19□□□□□ -1.9
SHOXO15266 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.19□□□□□ -1.9
SHOXO15266 MIR3160-1-201ENST00000577972 85 ntBASIC3.19□□□□□ -1.9
SHOXO15266 MIR4744-201ENST00000581563 82 ntBASIC3.19□□□□□ -1.9
SHOXO15266 MIR3199-1-201ENST00000582434 88 ntBASIC3.19□□□□□ -1.9
SHOXO15266 MIR3939-201ENST00000582614 106 ntBASIC3.19□□□□□ -1.9
SHOXO15266 AC084757.4-201ENST00000616350 526 ntBASIC3.19□□□□□ -1.9
SHOXO15266 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHOXO15266 MIR5739-201ENST00000619803 80 ntBASIC3.19□□□□□ -1.9
SHOXO15266 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SHOXO15266 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.18□□□□□ -1.9
SHOXO15266 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SHOXO15266 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SHOXO15266 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHOXO15266 AC134026.1-201ENST00000623249 2239 ntBASIC3.18□□□□□ -1.9
SHOXO15266 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
SHOXO15266 RNA5SP399-201ENST00000364003 117 ntBASIC3.18□□□□□ -1.9
SHOXO15266 RNU6-438P-201ENST00000365561 103 ntBASIC3.18□□□□□ -1.9
SHOXO15266 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
SHOXO15266 BMS1P22-201ENST00000414726 313 ntBASIC3.18□□□□□ -1.9
SHOXO15266 AC008134.1-201ENST00000420943 193 ntBASIC3.18□□□□□ -1.9
SHOXO15266 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.18□□□□□ -1.9
SHOXO15266 HSPE1P21-201ENST00000438283 308 ntBASIC3.18□□□□□ -1.9
SHOXO15266 CKS1BP2-201ENST00000497342 240 ntBASIC3.18□□□□□ -1.9
SHOXO15266 AC010598.1-201ENST00000510378 103 ntBASIC3.18□□□□□ -1.9
SHOXO15266 RNU6-948P-201ENST00000516374 107 ntBASIC3.18□□□□□ -1.9
SHOXO15266 CYCSP29-201ENST00000533731 318 ntBASIC3.18□□□□□ -1.9
SHOXO15266 AC025884.1-201ENST00000556034 378 ntBASIC3.18□□□□□ -1.9
SHOXO15266 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.18□□□□□ -1.9
SHOXO15266 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.18□□□□□ -1.9
SHOXO15266 MIR7515-201ENST00000637837 67 ntBASIC3.18□□□□□ -1.9
SHOXO15266 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SHOXO15266 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.18□□□□□ -1.9
SHOXO15266 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.18□□□□□ -1.9
SHOXO15266 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHOXO15266 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHOXO15266 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHOXO15266 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHOXO15266 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.17□□□□□ -1.9
SHOXO15266 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SHOXO15266 MIR367-201ENST00000362299 68 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RNU1-72P-201ENST00000362976 153 ntBASIC3.17□□□□□ -1.9
SHOXO15266 RNU6-525P-201ENST00000363685 104 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms