Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 Y_RNA.172-201ENST00000363765 102 ntBASIC3.74□□□□□ -1.81
SOX1O00570 RNU6-1210P-201ENST00000363775 107 ntBASIC3.74□□□□□ -1.81
SOX1O00570 Y_RNA.361-201ENST00000365515 120 ntBASIC3.74□□□□□ -1.81
SOX1O00570 SNORA20-201ENST00000384662 132 ntBASIC3.74□□□□□ -1.81
SOX1O00570 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.74□□□□□ -1.81
SOX1O00570 AL121914.1-201ENST00000450188 156 ntBASIC3.74□□□□□ -1.81
SOX1O00570 RNU7-141P-201ENST00000459304 62 ntBASIC3.74□□□□□ -1.81
SOX1O00570 SRIP1-201ENST00000489235 288 ntBASIC3.74□□□□□ -1.81
SOX1O00570 AC112693.2-201ENST00000556538 232 ntBASIC3.74□□□□□ -1.81
SOX1O00570 GTF3AP2-201ENST00000557014 266 ntBASIC3.74□□□□□ -1.81
SOX1O00570 AC090877.1-201ENST00000561418 344 ntBASIC3.74□□□□□ -1.81
SOX1O00570 AC002076.2-201ENST00000617362 122 ntBASIC3.74□□□□□ -1.81
SOX1O00570 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.74□□□□□ -1.81
SOX1O00570 AL773545.4-201ENST00000637262 310 ntBASIC3.74□□□□□ -1.81
SOX1O00570 AL513478.4-201ENST00000641636 310 ntBASIC3.74□□□□□ -1.81
SOX1O00570 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.74□□□□□ -1.81
SOX1O00570 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SOX1O00570 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX1O00570 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
SOX1O00570 AC026241.1-201ENST00000517873 2142 ntBASIC3.73□□□□□ -1.81
SOX1O00570 AC069528.2-201ENST00000624849 1991 ntBASIC3.73□□□□□ -1.81
SOX1O00570 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX1O00570 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX1O00570 RNU6-655P-201ENST00000362858 107 ntBASIC3.73□□□□□ -1.81
SOX1O00570 Y_RNA.542-201ENST00000384641 111 ntBASIC3.73□□□□□ -1.81
SOX1O00570 RNU6-1228P-201ENST00000391014 107 ntBASIC3.73□□□□□ -1.81
SOX1O00570 HSPE1P26-201ENST00000405341 275 ntBASIC3.73□□□□□ -1.81
SOX1O00570 RNU2-49P-201ENST00000410666 184 ntBASIC3.73□□□□□ -1.81
SOX1O00570 RNU4-47P-201ENST00000410876 114 ntBASIC3.73□□□□□ -1.81
SOX1O00570 AC006461.1-201ENST00000412637 326 ntBASIC3.73□□□□□ -1.81
SOX1O00570 AL513477.1-202ENST00000417061 214 ntBASIC3.73□□□□□ -1.81
SOX1O00570 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
SOX1O00570 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX1O00570 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX1O00570 AC245047.8-201ENST00000456455 284 ntBASIC3.73□□□□□ -1.81
SOX1O00570 RNU1-41P-201ENST00000516161 162 ntBASIC3.73□□□□□ -1.81
SOX1O00570 RNU1-48P-201ENST00000516400 162 ntBASIC3.73□□□□□ -1.81
SOX1O00570 RNU6-919P-201ENST00000516731 104 ntBASIC3.73□□□□□ -1.81
SOX1O00570 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.73□□□□□ -1.81
SOX1O00570 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.73□□□□□ -1.81
SOX1O00570 RPL17P51-201ENST00000605218 238 ntBASIC3.73□□□□□ -1.81
SOX1O00570 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.73□□□□□ -1.81
SOX1O00570 AL138880.2-201ENST00000616214 239 ntBASIC3.73□□□□□ -1.81
SOX1O00570 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SOX1O00570 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SOX1O00570 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SOX1O00570 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX1O00570 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.73□□□□□ -1.81
SOX1O00570 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX1O00570 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.72□□□□□ -1.81
SOX1O00570 AC093908.1-201ENST00000623125 8092 ntBASIC3.72□□□□□ -1.81
SOX1O00570 Y_RNA.420-201ENST00000384043 110 ntBASIC3.72□□□□□ -1.81
SOX1O00570 SNORD37.2-201ENST00000391075 66 ntBASIC3.72□□□□□ -1.81
SOX1O00570 MIR887-201ENST00000401258 79 ntBASIC3.72□□□□□ -1.81
SOX1O00570 RNA5SP239-201ENST00000410218 129 ntBASIC3.72□□□□□ -1.81
SOX1O00570 RNA5SP247-201ENST00000411181 105 ntBASIC3.72□□□□□ -1.81
SOX1O00570 AL035461.1-201ENST00000421490 332 ntBASIC3.72□□□□□ -1.81
SOX1O00570 AL139281.1-201ENST00000422120 335 ntBASIC3.72□□□□□ -1.81
SOX1O00570 AC010099.1-201ENST00000455434 375 ntBASIC3.72□□□□□ -1.81
SOX1O00570 AC091826.1-201ENST00000514065 313 ntBASIC3.72□□□□□ -1.81
SOX1O00570 HSPE1P18-201ENST00000517602 280 ntBASIC3.72□□□□□ -1.81
SOX1O00570 MIR4724-201ENST00000579485 89 ntBASIC3.72□□□□□ -1.81
SOX1O00570 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX1O00570 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX1O00570 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SOX1O00570 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SOX1O00570 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SOX1O00570 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SOX1O00570 MAPK10-253ENST00000641010 4072 ntBASIC3.72□□□□□ -1.81
SOX1O00570 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.72□□□□□ -1.81
SOX1O00570 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SOX1O00570 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SOX1O00570 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX1O00570 UBE3AP2-201ENST00000429033 2259 ntBASIC3.71□□□□□ -1.82
SOX1O00570 AP002088.1-201ENST00000382740 395 ntBASIC3.71□□□□□ -1.82
SOX1O00570 RNU6-80P-201ENST00000384195 107 ntBASIC3.71□□□□□ -1.82
SOX1O00570 RNU6-198P-201ENST00000384258 104 ntBASIC3.71□□□□□ -1.82
SOX1O00570 RNU1-57P-201ENST00000384491 166 ntBASIC3.71□□□□□ -1.82
SOX1O00570 MIR548B-201ENST00000385247 97 ntBASIC3.71□□□□□ -1.82
SOX1O00570 RNU6-750P-201ENST00000390946 107 ntBASIC3.71□□□□□ -1.82
SOX1O00570 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX1O00570 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX1O00570 RNU6-1234P-201ENST00000516877 103 ntBASIC3.71□□□□□ -1.82
SOX1O00570 MIR3646-201ENST00000578301 84 ntBASIC3.71□□□□□ -1.82
SOX1O00570 AC025754.2-201ENST00000606491 432 ntBASIC3.71□□□□□ -1.82
SOX1O00570 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX1O00570 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX1O00570 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX1O00570 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX1O00570 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX1O00570 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX1O00570 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SOX1O00570 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SOX1O00570 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX1O00570 RNU6-643P-201ENST00000384018 107 ntBASIC3.7□□□□□ -1.82
SOX1O00570 RNU6-44P-201ENST00000384045 107 ntBASIC3.7□□□□□ -1.82
SOX1O00570 AC069285.2-201ENST00000440210 275 ntBASIC3.7□□□□□ -1.82
SOX1O00570 RNU7-197P-201ENST00000458836 62 ntBASIC3.7□□□□□ -1.82
SOX1O00570 RPL23AP62-201ENST00000463396 453 ntBASIC3.7□□□□□ -1.82
SOX1O00570 AC010469.1-201ENST00000463864 576 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms