Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 Y_RNA.683-201ENST00000516508 93 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-635P-201ENST00000516651 102 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-897P-201ENST00000517135 105 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 MIR4659A-201ENST00000580269 81 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 AL356280.1-201ENST00000603614 379 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.772-201ENST00000606692 102 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.47-201ENST00000362697 108 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.144-201ENST00000363521 113 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-463P-201ENST00000384340 107 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 MIR592-201ENST00000384959 97 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 MIR568-201ENST00000385036 95 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-220P-201ENST00000390919 107 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.595-201ENST00000410403 105 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-130P-201ENST00000411112 103 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 AL161788.1-201ENST00000441805 169 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 AC004386.2-201ENST00000441858 148 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 AC010095.1-201ENST00000443543 144 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 AC009237.7-201ENST00000447357 229 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-344P-201ENST00000516635 111 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 RNU2-44P-201ENST00000516795 194 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 DEFB131C-201ENST00000528817 165 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 MTND5P35-201ENST00000557537 1720 ntBASIC2.85□□□□□ -1.95
PCDHA3Q9Y5H8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 AL365361.1-201ENST00000566942 3481 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-770P-201ENST00000363929 105 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-944P-201ENST00000364023 107 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 RNA5SP240-201ENST00000365355 128 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 SNORA18.2-201ENST00000383865 132 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-26P-201ENST00000383985 107 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.439-201ENST00000384119 94 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 MIR627-201ENST00000384979 97 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 FO393413.1-201ENST00000402892 195 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 MIR1294-201ENST00000408503 142 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 ELOCP20-201ENST00000422460 345 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 AL731563.1-201ENST00000442202 214 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 PCNPP5-201ENST00000452246 481 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 AC091179.3-201ENST00000474761 144 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 AC074133.1-201ENST00000515696 183 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 AC022080.3-201ENST00000544433 482 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 MIR3117-201ENST00000584034 78 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 MZT1P2-201ENST00000604387 248 ntBASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PCDHA3Q9Y5H8 Z82209.1-201ENST00000422141 2135 ntBASIC2.84□□□□□ -1.96
PCDHA3Q9Y5H8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
PCDHA3Q9Y5H8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PCDHA3Q9Y5H8 SNORD56.5-201ENST00000364281 72 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 MIR634-201ENST00000385208 97 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AC003685.2-201ENST00000422795 395 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 Z96811.1-201ENST00000445880 108 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 RPS27AP9-201ENST00000477681 438 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 SNORA40.15-201ENST00000516884 107 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AC233702.2-202ENST00000562547 291 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 MIR5006-201ENST00000583027 110 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 7SK.10-201ENST00000621414 298 ntBASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PCDHA3Q9Y5H8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 RNU6-196P-201ENST00000384315 107 ntBASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 AC004866.1-201ENST00000411748 78 ntBASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 RPL26P26-201ENST00000480251 434 ntBASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 SNORA40.9-201ENST00000515895 93 ntBASIC2.82□□□□□ -1.96
PCDHA3Q9Y5H8 RNU6-397P-201ENST00000516226 104 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms