Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 AC068587.5-201ENST00000528506 175 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 AP002001.1-203ENST00000534002 267 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 AC004584.2-201ENST00000570407 410 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 MIR5006-201ENST00000583027 110 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 TCL6_2.1-201ENST00000615162 119 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 AC138649.3-201ENST00000622154 254 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 AC013437.2-201ENST00000639587 677 ntBASIC0.22□□□□□ -2.37
CTNNBIP1Q9NSA3 RNU6-1303P-201ENST00000364841 107 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-715P-201ENST00000365204 103 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 SNORD115-7-201ENST00000365306 82 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-533P-201ENST00000384144 107 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 SNORD89-201ENST00000390981 114 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU1-119P-201ENST00000391122 165 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-57P-201ENST00000411348 103 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 MTND3P17-201ENST00000416968 344 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 EXOSC3P1-201ENST00000448649 500 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 AL031274.1-201ENST00000450334 232 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 AC106038.2-201ENST00000520706 568 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 AP003181.2-201ENST00000528941 181 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 AC016256.1-201ENST00000547971 354 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 AC243829.6-201ENST00000612652 106 ntBASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.21□□□□□ -2.38
CTNNBIP1Q9NSA3 MIR1276-201ENST00000408707 83 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 MTND1P20-201ENST00000430341 950 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 AC004386.2-201ENST00000441858 148 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 MTCO2P7-201ENST00000446518 666 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 SNORA68.3-201ENST00000515906 83 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 AC027419.1-201ENST00000522976 328 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 AP003168.1-201ENST00000530091 307 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 AC103996.1-201ENST00000555468 102 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 7SK.10-201ENST00000621414 298 ntBASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.2□□□□□ -2.38
CTNNBIP1Q9NSA3 AP000568.1-201ENST00000282964 442 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 MIR586-201ENST00000385035 97 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-550P-201ENST00000391057 101 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 MIR548J-201ENST00000408833 112 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AC016909.1-201ENST00000415916 166 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AC008134.1-201ENST00000420943 193 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AL354692.1-201ENST00000423044 315 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 MTATP6P16-201ENST00000434543 526 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AC005002.2-201ENST00000438228 269 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AL603825.1-201ENST00000438481 80 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AC009237.7-201ENST00000447357 229 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 LINC01399-202ENST00000458450 244 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-1178P-201ENST00000516674 107 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 MIR5000-201ENST00000577717 103 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AL121992.2-201ENST00000606262 256 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AC004832.4-201ENST00000608952 331 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AL391903.3-201ENST00000612158 163 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 AC068787.1-201ENST00000623908 691 ntBASIC0.19□□□□□ -2.38
CTNNBIP1Q9NSA3 Y_RNA.18-201ENST00000362461 102 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-827P-201ENST00000365553 106 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 Y_RNA.480-201ENST00000384364 102 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-1000P-201ENST00000391066 106 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 MTCO2P21-201ENST00000419780 677 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 MTCO2P23-201ENST00000425216 680 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 DAP3P1-201ENST00000441522 278 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU7-57P-201ENST00000459540 60 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 MIR6788-201ENST00000618842 66 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 AC243829.3-201ENST00000622177 108 ntBASIC0.18□□□□□ -2.38
CTNNBIP1Q9NSA3 MIRLET7D-201ENST00000362263 87 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 RNY1P12-201ENST00000364251 105 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 AC244098.3-201ENST00000424803 96 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 RPL23AP50-201ENST00000434149 455 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 snoU13.6-201ENST00000458785 104 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-237P-201ENST00000515985 71 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 RNU6-496P-201ENST00000516145 99 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 AC025647.1-201ENST00000517879 253 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 SNORA28-201ENST00000606769 126 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 MIR6504-201ENST00000613520 61 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 AL359757.2-201ENST00000624309 274 ntBASIC0.17□□□□□ -2.38
CTNNBIP1Q9NSA3 U6.114-201ENST00000636407 96 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms