Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.12□□□□□ -1.59
RTN4Q9NQC3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTN4Q9NQC3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTN4Q9NQC3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTN4Q9NQC3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RTN4Q9NQC3 CPHL1P-201ENST00000461341 3407 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC5.11□□□□□ -1.59
RTN4Q9NQC3 U8.4-201ENST00000363626 134 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RNU6-187P-201ENST00000384139 106 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RNU6-1186P-201ENST00000410429 97 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RHEBP3-201ENST00000411920 351 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 VTRNA2-2P-201ENST00000516091 103 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RNU7-121P-201ENST00000516604 62 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RN7SKP66-201ENST00000516681 231 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RNU6-453P-201ENST00000516819 85 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RN7SKP282-201ENST00000516824 299 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RN7SKP147-201ENST00000517154 244 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 AC011604.1-201ENST00000545978 196 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 MIR3691-201ENST00000578066 90 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 AC007448.1-201ENST00000582714 234 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 SDR42E1P1-201ENST00000611327 477 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 MIR486-1-201ENST00000612171 68 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 AC132825.6-201ENST00000638861 357 ntBASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTN4Q9NQC3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTN4Q9NQC3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTN4Q9NQC3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.1□□□□□ -1.59
RTN4Q9NQC3 Y_RNA.203-201ENST00000364106 102 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 SNORD56.5-201ENST00000364281 72 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 Y_RNA.572-201ENST00000384757 98 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RTN4Q9NQC3 CST2P1-201ENST00000425770 87 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 UBBP3-201ENST00000445497 241 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 RPS4XP11-201ENST00000446897 772 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.1□□□□□ -1.59
RTN4Q9NQC3 RNU6-1041P-201ENST00000516254 102 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 MTND5P41-201ENST00000517498 206 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 MIR338-201ENST00000636369 67 ntBASIC5.1□□□□□ -1.59
RTN4Q9NQC3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTN4Q9NQC3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTN4Q9NQC3 RNU6-1072P-201ENST00000384703 107 ntBASIC5.09□□□□□ -1.59
RTN4Q9NQC3 RNU6-443P-201ENST00000384780 107 ntBASIC5.09□□□□□ -1.59
RTN4Q9NQC3 RNU4-43P-201ENST00000410628 137 ntBASIC5.09□□□□□ -1.59
RTN4Q9NQC3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC5.09□□□□□ -1.59
RTN4Q9NQC3 SCARNA22-201ENST00000503991 125 ntBASIC5.09□□□□□ -1.59
RTN4Q9NQC3 RNA5SP34-201ENST00000516887 130 ntBASIC5.09□□□□□ -1.59
RTN4Q9NQC3 Y_RNA.778-201ENST00000620203 90 ntBASIC5.09□□□□□ -1.59
RTN4Q9NQC3 AC018630.2-201ENST00000534866 2403 ntBASIC5.09□□□□□ -1.59
RTN4Q9NQC3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
RTN4Q9NQC3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4Q9NQC3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4Q9NQC3 RNU6-704P-201ENST00000364162 103 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 RNU6-643P-201ENST00000384018 107 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 RNU6-136P-201ENST00000384663 107 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 RNA5SP323-201ENST00000391094 133 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 AC112498.1-201ENST00000444401 332 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 RNU6-1096P-201ENST00000517089 102 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 AL358944.1-201ENST00000528537 144 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.08□□□□□ -1.6
RTN4Q9NQC3 AC105129.1-201ENST00000560250 297 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.08□□□□□ -1.6
RTN4Q9NQC3 AC073413.2-201ENST00000604332 360 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 AC100821.1-201ENST00000523153 2479 ntBASIC5.08□□□□□ -1.6
RTN4Q9NQC3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4Q9NQC3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.07□□□□□ -1.6
RTN4Q9NQC3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RTN4Q9NQC3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
RTN4Q9NQC3 SNORA11.4-201ENST00000408823 129 ntBASIC5.07□□□□□ -1.6
RTN4Q9NQC3 AC008953.1-201ENST00000497334 318 ntBASIC5.07□□□□□ -1.6
RTN4Q9NQC3 CYCSP26-201ENST00000534107 320 ntBASIC5.07□□□□□ -1.6
RTN4Q9NQC3 MIR3126-201ENST00000577443 74 ntBASIC5.07□□□□□ -1.6
RTN4Q9NQC3 DNAJC19P2-201ENST00000593340 302 ntBASIC5.07□□□□□ -1.6
RTN4Q9NQC3 MIR432-201ENST00000606207 94 ntBASIC5.07□□□□□ -1.6
RTN4Q9NQC3 JPX_2.1-201ENST00000614161 69 ntBASIC5.07□□□□□ -1.6
RTN4Q9NQC3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
RTN4Q9NQC3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4Q9NQC3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 Y_RNA.242-201ENST00000364473 110 ntBASIC5.06□□□□□ -1.6
RTN4Q9NQC3 Y_RNA.488-201ENST00000384403 102 ntBASIC5.06□□□□□ -1.6
RTN4Q9NQC3 RN7SL808P-201ENST00000496066 299 ntBASIC5.06□□□□□ -1.6
RTN4Q9NQC3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.06□□□□□ -1.6
RTN4Q9NQC3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 AL445567.2-201ENST00000618935 498 ntBASIC5.06□□□□□ -1.6
RTN4Q9NQC3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTN4Q9NQC3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTN4Q9NQC3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTN4Q9NQC3 RNU1-63P-201ENST00000383902 164 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 RNU6-1080P-201ENST00000383982 107 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 MIR765-201ENST00000390226 114 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 MIR1178-201ENST00000408396 91 ntBASIC5.05□□□□□ -1.6
RTN4Q9NQC3 AC093162.1-201ENST00000419682 124 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 527 ms