Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RNU6-383P-201ENST00000410864 94 ntBASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 RNA5SP112-201ENST00000515937 99 ntBASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 RNU7-115P-201ENST00000516433 55 ntBASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 RNA5SP164-201ENST00000516533 110 ntBASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 TUG1_4.1-201ENST00000619464 181 ntBASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 CR392039.5-201ENST00000623201 510 ntBASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.62□□□□□ -1.83
BHLHE41Q9C0J9 MAPK10-372ENST00000641954 3413 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 RNU6-271P-201ENST00000363858 105 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 Y_RNA.273-201ENST00000364703 102 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 Y_RNA.542-201ENST00000384641 111 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 RPL21P65-201ENST00000406094 466 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 MIR1294-201ENST00000408503 142 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 AL121890.1-201ENST00000435457 205 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 SNRPGP3-201ENST00000469405 227 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 MIR449C-201ENST00000516047 92 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 RN7SKP83-201ENST00000516512 178 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 RNU6-1337P-201ENST00000516525 95 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 AC011603.4-201ENST00000611325 277 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 AL354798.1-201ENST00000622505 329 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 MIR6844-201ENST00000637122 62 ntBASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BHLHE41Q9C0J9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 MIR372-201ENST00000362225 67 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 RNA5SP295-201ENST00000362655 121 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 SNORA20B-201ENST00000384220 132 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 SNORD20-201ENST00000384550 80 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 AL355796.1-201ENST00000406706 323 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 RN7SKP202-201ENST00000410439 330 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 RPL23AP58-201ENST00000440453 469 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 AL358232.1-201ENST00000448030 501 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 AL162151.2-201ENST00000448875 158 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 HSPE1P13-201ENST00000451143 297 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 RNU6-561P-201ENST00000516222 102 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 MIR4429-201ENST00000580105 73 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 AC007256.1-201ENST00000392253 2765 ntBASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.6□□□□□ -1.83
BHLHE41Q9C0J9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 Y_RNA.353-201ENST00000365440 108 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 SNORD14D-201ENST00000384390 87 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 MIR554-201ENST00000384874 96 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 AL138878.1-201ENST00000405131 347 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 RPS27P1-201ENST00000450552 247 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 HMGN2P7-201ENST00000456186 273 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 RNA5SP208-201ENST00000516156 78 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 RNU6-1234P-201ENST00000516877 103 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 MIR3646-201ENST00000578301 84 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 MIR4286-201ENST00000580651 93 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 AC006130.2-201ENST00000586202 326 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 MIR6500-201ENST00000622700 86 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 snoZ196.1-201ENST00000625269 89 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 AL159152.1-201ENST00000635019 2587 ntBASIC3.59□□□□□ -1.83
BHLHE41Q9C0J9 AC000403.1-201ENST00000613696 3585 ntBASIC3.59□□□□□ -1.84
BHLHE41Q9C0J9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
BHLHE41Q9C0J9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
BHLHE41Q9C0J9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 AL049781.1-201ENST00000623195 3585 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 SNORA27.1-201ENST00000362604 124 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-80P-201ENST00000384195 107 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 SNORD116-13-201ENST00000384408 92 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 AC006445.1-201ENST00000491925 405 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 RPS27P26-201ENST00000494583 239 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 AC023632.4-201ENST00000517783 191 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 AC027419.1-201ENST00000522976 328 ntBASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.58□□□□□ -1.84
BHLHE41Q9C0J9 SNORA62.6-201ENST00000606322 83 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms