Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CCDC162P-202ENST00000368966 6751 ntBASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 RNU1-58P-201ENST00000362413 163 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 SNORD16-201ENST00000362803 99 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 RN7SKP15-201ENST00000364742 309 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR183-201ENST00000384958 110 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 MT-TN-201ENST00000387400 73 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 AC003685.2-201ENST00000422795 395 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 AC019185.3-201ENST00000438805 323 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 RPL30P7-201ENST00000479312 323 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 AC018645.1-201ENST00000505003 109 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 RNU7-174P-201ENST00000516248 59 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 AC015912.2-201ENST00000571053 181 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR4420-201ENST00000583944 77 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 AC020916.2-201ENST00000591242 360 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR6731-201ENST00000614863 72 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR7854-201ENST00000620068 65 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 U4.4-201ENST00000620626 117 ntBASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 CR1-204ENST00000367052 7469 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 CR1-205ENST00000367053 7469 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC3.06□□□□□ -1.92
KRTAP3-3Q9BYR6 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 RNU6-986P-201ENST00000363133 102 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR520A-201ENST00000384862 85 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 AC104333.2-201ENST00000422630 192 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 Z74021.1-201ENST00000423610 407 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 RN7SL172P-201ENST00000460535 303 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 RN7SL594P-201ENST00000470590 287 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 RN7SL70P-201ENST00000478322 302 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 AC010343.2-201ENST00000510162 224 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 RN7SL131P-201ENST00000579043 256 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 AL449363.1-201ENST00000617815 186 ntBASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 DLST-216ENST00000626051 252 ntTSL 5 BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC3.05□□□□□ -1.92
KRTAP3-3Q9BYR6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 RNA5SP514-201ENST00000363717 111 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 SNORA77.2-201ENST00000408571 112 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 AC093578.1-201ENST00000415219 368 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 AC118758.1-202ENST00000454719 225 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 RANP2-201ENST00000456833 229 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 ENPP7P3-201ENST00000509123 241 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 RNU4ATAC-201ENST00000580972 127 ntBASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.04□□□□□ -1.92
KRTAP3-3Q9BYR6 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms