Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC079140.3-201ENST00000511111 550 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC091133.4-201ENST00000511142 308 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC010486.3-201ENST00000511602 785 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 RNU6-1038P-201ENST00000516516 104 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 SUMO2P18-201ENST00000518873 252 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 PRR13P7-201ENST00000605538 430 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC064836.2-201ENST00000609491 462 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC103705.1-201ENST00000619013 241 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 RNU6-227P-201ENST00000362865 103 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 Y_RNA.132-201ENST00000363421 102 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 RNU6-1026P-201ENST00000384465 108 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 RNU6-296P-201ENST00000384608 107 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AF228730.1-201ENST00000397972 663 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 RNU4-55P-201ENST00000410731 137 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC091812.1-201ENST00000432235 1948 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 RPL9P9-202ENST00000466501 579 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC005908.1-201ENST00000468701 347 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC025465.4-201ENST00000513422 638 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 SNORA40.12-201ENST00000516329 111 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 RNU6-1069P-201ENST00000516612 133 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC087854.1-201ENST00000519706 414 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 CENPUP1-201ENST00000526649 1202 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC083806.3-201ENST00000614016 455 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC090582.1-201ENST00000636321 199 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 AC068205.3-201ENST00000636385 468 ntBASIC1.42□□□□□ -2.18
RPAP1Q9BWH6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 SNORD114-27-201ENST00000363766 70 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 RNU6-38P-201ENST00000384085 107 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 SNORD37.1-201ENST00000390968 65 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AC099677.2-201ENST00000436385 175 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 RPS29P27-201ENST00000463711 170 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AC010531.2-201ENST00000465012 153 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AC092991.1-201ENST00000477176 376 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 HMGN1P13-201ENST00000505795 138 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 RNA5SP401-201ENST00000515920 127 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AP003034.1-201ENST00000534621 422 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AC016256.1-201ENST00000547971 354 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AL158211.1-201ENST00000566763 763 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 AC139792.3-201ENST00000623525 224 ntBASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
RPAP1Q9BWH6 RNU6-545P-201ENST00000362681 104 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 RNU6-862P-201ENST00000362804 105 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 RNU4-66P-201ENST00000365199 138 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 Y_RNA.378-201ENST00000365652 113 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 SNORA18.2-201ENST00000383865 132 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 DEFB108C-201ENST00000400154 252 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 MIR1285-1-201ENST00000408593 84 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 MTCO2P16-201ENST00000436962 677 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 snoU13.6-201ENST00000458785 104 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 AC025465.3-201ENST00000510570 311 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 AC026407.1-201ENST00000518369 204 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 AL118558.2-201ENST00000556294 238 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 AC092747.3-201ENST00000603769 301 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 RN7SKP299-201ENST00000606679 301 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 AP001330.5-201ENST00000607176 411 ntBASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RPAP1Q9BWH6 RNU6-562P-201ENST00000362731 107 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 RNU6-1329P-201ENST00000365664 107 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 SNORA29-201ENST00000384183 140 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 MIR598-201ENST00000384868 97 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 MIR548J-201ENST00000408833 112 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 AL663109.1-201ENST00000411498 844 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 MTCO1P21-201ENST00000416634 589 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 MTND3P9-201ENST00000429526 346 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 USP9YP28-201ENST00000435142 589 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 UBE2V1P8-201ENST00000437166 265 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 snoU13.9-201ENST00000458927 103 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 AC104576.1-201ENST00000524225 88 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 AC104383.1-201ENST00000530297 370 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 RRN3P3-201ENST00000549207 578 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 AC025423.5-201ENST00000550230 219 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 HMGB1P33-201ENST00000563485 527 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 AL357078.3-201ENST00000607528 618 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.39□□□□□ -2.19
RPAP1Q9BWH6 RNU6-414P-201ENST00000363705 104 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 RNU6-1317P-201ENST00000364582 104 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 RNU6-877P-201ENST00000383868 107 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 Y_RNA.409-201ENST00000383990 98 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 RNU6-418P-201ENST00000384035 107 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 RNU6-360P-201ENST00000390944 104 ntBASIC1.38□□□□□ -2.19
RPAP1Q9BWH6 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms