Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC115990.1-201ENST00000526957 301 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 AC087441.2-201ENST00000529141 262 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.77□□□□□ -1.97
TIMP4Q99727 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TIMP4Q99727 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TIMP4Q99727 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TIMP4Q99727 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
TIMP4Q99727 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TIMP4Q99727 MIR410-201ENST00000362222 80 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 Y_RNA.122-201ENST00000363331 96 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 RNU4-56P-201ENST00000364700 142 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 RNY4P28-201ENST00000365281 93 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 SNORA44-201ENST00000384584 132 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 SNORD67-201ENST00000390833 111 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 RNU6-493P-201ENST00000391321 108 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 RNU2-61P-201ENST00000411069 191 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 COX6CP10-201ENST00000416832 224 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 MTCO1P5-201ENST00000433573 344 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.76□□□□□ -1.97
TIMP4Q99727 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.76□□□□□ -1.97
TIMP4Q99727 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.76□□□□□ -1.97
TIMP4Q99727 AC091959.1-201ENST00000495857 238 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.76□□□□□ -1.97
TIMP4Q99727 AC022559.1-201ENST00000520905 205 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 CBX3P4-201ENST00000538909 354 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 AC018448.1-201ENST00000552843 316 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.76□□□□□ -1.97
TIMP4Q99727 CYP4A27P-201ENST00000567218 190 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.76□□□□□ -1.97
TIMP4Q99727 AC093732.2-201ENST00000607950 274 ntBASIC2.76□□□□□ -1.97
TIMP4Q99727 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.76□□□□□ -1.97
TIMP4Q99727 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.76□□□□□ -1.97
TIMP4Q99727 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TIMP4Q99727 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TIMP4Q99727 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TIMP4Q99727 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.76□□□□□ -1.97
TIMP4Q99727 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TIMP4Q99727 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TIMP4Q99727 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TIMP4Q99727 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
TIMP4Q99727 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.75□□□□□ -1.97
TIMP4Q99727 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TIMP4Q99727 RNU6-799P-201ENST00000363567 107 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 Y_RNA.275-201ENST00000364726 110 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 RNU6-662P-201ENST00000384253 104 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 RNU6-378P-201ENST00000384324 107 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 RNU6-1289P-201ENST00000384431 106 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 MIR634-201ENST00000385208 97 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 MIR147B-201ENST00000390185 80 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 CBX3P9-201ENST00000402326 552 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 RPS26P42-201ENST00000413485 326 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.75□□□□□ -1.97
TIMP4Q99727 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.75□□□□□ -1.97
TIMP4Q99727 AC009237.7-201ENST00000447357 229 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AL441985.1-201ENST00000457727 251 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AP001486.1-201ENST00000463339 476 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AC091179.3-201ENST00000474761 144 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AC103975.1-201ENST00000482506 483 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 RNU6-966P-201ENST00000516479 104 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.75□□□□□ -1.97
TIMP4Q99727 EIF4BP1-201ENST00000554881 351 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.75□□□□□ -1.97
TIMP4Q99727 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.75□□□□□ -1.97
TIMP4Q99727 MIR3923-201ENST00000579521 83 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 LARP7P3-201ENST00000579888 337 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.75□□□□□ -1.97
TIMP4Q99727 RPS15AP11-201ENST00000594193 385 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AL137843.1-201ENST00000605078 385 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.75□□□□□ -1.97
TIMP4Q99727 AC004467.1-201ENST00000615678 330 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
TIMP4Q99727 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TIMP4Q99727 FAM35CP-201ENST00000554755 2470 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AC010889.1-201ENST00000566193 2666 ntBASIC2.75□□□□□ -1.97
TIMP4Q99727 AC000403.1-201ENST00000613696 3585 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.74□□□□□ -1.97
TIMP4Q99727 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.74□□□□□ -1.97
TIMP4Q99727 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
TIMP4Q99727 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
TIMP4Q99727 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.74□□□□□ -1.97
TIMP4Q99727 AC073325.2-201ENST00000339545 159 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 RNU6-545P-201ENST00000362681 104 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 Y_RNA.101-201ENST00000363154 102 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 RNU5F-3P-201ENST00000363767 117 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 RNU6-47P-201ENST00000383866 107 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 RNU6-793P-201ENST00000384233 104 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 PCNPP3-201ENST00000393579 471 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 COTL1P1-201ENST00000422309 375 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.74□□□□□ -1.97
TIMP4Q99727 AC007395.1-201ENST00000451333 677 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AC007215.1-201ENST00000464893 276 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AL049873.1-201ENST00000480540 376 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 SNORA27.4-201ENST00000516650 95 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 SCARNA13-201ENST00000516672 275 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 RNU6-861P-201ENST00000516745 106 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms