Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SH3RF2Q8TEC5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.21□□□□□ -1.89
SH3RF2Q8TEC5 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.89
SH3RF2Q8TEC5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 SNORD56.3-201ENST00000363507 71 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 RNU6-727P-201ENST00000363592 107 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 SNORA80A-201ENST00000363922 136 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.199-201ENST00000364014 102 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.275-201ENST00000364726 110 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 MIR29B2-201ENST00000385055 81 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 SNORD67-201ENST00000390833 111 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 RNU6-1248P-201ENST00000391096 64 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AL603908.1-201ENST00000406098 201 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AC004386.2-201ENST00000441858 148 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AC009237.7-201ENST00000447357 229 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 PRELID3BP1-201ENST00000457142 540 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 SNORA27.4-201ENST00000516650 95 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 MIR4643-201ENST00000577473 78 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 MIR5006-201ENST00000583027 110 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AL512605.2-201ENST00000592972 256 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 AC006380.1-201ENST00000603598 186 ntBASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.9
SH3RF2Q8TEC5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.274-201ENST00000364714 101 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.446-201ENST00000384178 104 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.555-201ENST00000384673 110 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.590-201ENST00000410140 107 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 EIF4EP4-201ENST00000424916 578 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC025750.2-201ENST00000442609 450 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC006539.3-201ENST00000454258 129 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC103810.1-201ENST00000579873 453 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC004792.1-201ENST00000614523 137 ntBASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF2Q8TEC5 AC091152.2-201ENST00000591628 2569 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC000403.1-201ENST00000613696 3585 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 MIR22-201ENST00000362190 85 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 RNU6-486P-201ENST00000363116 107 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 RNU6-740P-201ENST00000364734 105 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 RNU2-54P-201ENST00000410299 190 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 RNU2-61P-201ENST00000411069 191 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 RPL19P1-201ENST00000411635 428 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC022018.1-201ENST00000430685 241 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC091959.1-201ENST00000495857 238 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.679-201ENST00000516416 91 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 RNU2-44P-201ENST00000516795 194 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AL033523.1-201ENST00000605153 153 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 UCA1.1-201ENST00000620952 75 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC091932.3-201ENST00000624223 323 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC110079.1-202ENST00000635213 138 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 AC068205.3-201ENST00000636385 468 ntBASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SH3RF2Q8TEC5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.82-201ENST00000363000 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.92-201ENST00000363043 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.235-201ENST00000364412 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.306-201ENST00000365015 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.312-201ENST00000365089 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.322-201ENST00000365151 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.415-201ENST00000384012 112 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.793-201ENST00000411222 111 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 AC009414.1-201ENST00000427200 443 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 ARF4P2-201ENST00000430209 526 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms