Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
TRIM50Q86XT4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM50Q86XT4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM50Q86XT4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
TRIM50Q86XT4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 SNORA22C-201ENST00000384614 134 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 RNA5SP424-201ENST00000390988 115 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 RNU6-735P-201ENST00000410612 107 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 AC010409.1-201ENST00000487382 476 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 TRBV12-2-201ENST00000489763 344 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 MIR4765-201ENST00000585007 77 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 AL161756.2-201ENST00000604597 246 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 MIR3658-201ENST00000636291 56 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 AP000553.6-201ENST00000641242 118 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 AC007256.1-201ENST00000392253 2765 ntBASIC4.11□□□□□ -1.75
TRIM50Q86XT4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM50Q86XT4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 Y_RNA.124-201ENST00000363339 93 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 RNA5SP322-201ENST00000363617 119 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 Y_RNA.172-201ENST00000363765 102 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 MIR218-2-201ENST00000385006 110 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 MIR616-201ENST00000385293 97 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 MIR526A2-201ENST00000390198 65 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 MIR1185-2-201ENST00000408687 86 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 AL121914.1-201ENST00000450188 156 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 U3.44-201ENST00000458938 192 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 HMGN2P9-201ENST00000476875 229 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 AC006445.1-201ENST00000491925 405 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 DNAJC19P2-201ENST00000593340 302 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 AC010332.2-201ENST00000613083 1904 ntBASIC4.1□□□□□ -1.75
TRIM50Q86XT4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM50Q86XT4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TRIM50Q86XT4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM50Q86XT4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM50Q86XT4 RNU6-1027P-201ENST00000383998 107 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 RNU1-89P-201ENST00000384592 164 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 MIR29B2-201ENST00000385055 81 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 RNA5SP354-201ENST00000391247 136 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 AC006461.1-201ENST00000412637 326 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.09□□□□□ -1.75
TRIM50Q86XT4 DBIP2-201ENST00000419076 262 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 AC017083.1-201ENST00000428093 483 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 RPS27P26-201ENST00000494583 239 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 AC103810.1-201ENST00000579873 453 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 AP001486.2-201ENST00000561652 5113 ntBASIC4.09□□□□□ -1.75
TRIM50Q86XT4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM50Q86XT4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.09□□□□□ -1.76
TRIM50Q86XT4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM50Q86XT4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 MIR367-201ENST00000362299 68 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 SNORA20-201ENST00000384662 132 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 RNVU1-14-201ENST00000384770 164 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 MIR23A-201ENST00000385245 73 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 MT-TT-201ENST00000387460 66 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 RNU6-1168P-201ENST00000390831 104 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 MIR513C-201ENST00000401352 84 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 AL139095.1-201ENST00000404326 391 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 AL137159.1-201ENST00000452808 512 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 RPS4XP2-201ENST00000458402 793 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 RNU7-14P-201ENST00000459331 62 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 MIR4724-201ENST00000579485 89 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 AC096577.2-201ENST00000611455 153 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 MIR7975-201ENST00000619350 68 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 AC068647.2-201ENST00000637380 353 ntBASIC4.08□□□□□ -1.76
TRIM50Q86XT4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM50Q86XT4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM50Q86XT4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM50Q86XT4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM50Q86XT4 RNA5SP295-201ENST00000362655 121 ntBASIC4.07□□□□□ -1.76
TRIM50Q86XT4 RNU6-199P-201ENST00000362954 107 ntBASIC4.07□□□□□ -1.76
TRIM50Q86XT4 U8.7-201ENST00000364940 136 ntBASIC4.07□□□□□ -1.76
TRIM50Q86XT4 SNORA40-201ENST00000388090 126 ntBASIC4.07□□□□□ -1.76
TRIM50Q86XT4 RPL30P13-201ENST00000418873 348 ntBASIC4.07□□□□□ -1.76
TRIM50Q86XT4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM50Q86XT4 AC009414.1-201ENST00000427200 443 ntBASIC4.07□□□□□ -1.76
TRIM50Q86XT4 CYCSP4-201ENST00000429682 331 ntBASIC4.07□□□□□ -1.76
TRIM50Q86XT4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM50Q86XT4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms