Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNORA18.2-201ENST00000383865 132 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 RNU6-106P-201ENST00000384405 107 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 RNU6-19P-201ENST00000384718 107 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 SNORA12.1-201ENST00000390873 148 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 U6atac.2-201ENST00000408644 118 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AL139247.1-201ENST00000422768 325 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AL591419.1-201ENST00000427423 339 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AC017083.1-201ENST00000428093 483 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AL133547.1-201ENST00000448546 220 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 RPL30P5-201ENST00000494923 336 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 Y_RNA.690-201ENST00000516603 95 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 MIR2114-201ENST00000516645 80 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 RNU6-762P-201ENST00000517107 102 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AC244505.7-201ENST00000599675 272 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AL034555.1-201ENST00000604816 211 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AC110741.2-201ENST00000605278 268 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 PCGEM1.1-201ENST00000613431 131 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AL596211.1-201ENST00000569873 2277 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.38□□□□□ -1.87
ATG4DQ86TL0 AC006504.1-201ENST00000562493 3666 ntBASIC3.38□□□□□ -1.87
ATG4DQ86TL0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 Y_RNA.124-201ENST00000363339 93 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 RNU6-309P-201ENST00000364573 106 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 U3.15-201ENST00000365398 212 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 AL133475.1-201ENST00000404414 305 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 RNU6-554P-201ENST00000410466 106 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 HMGN2P10-201ENST00000448085 265 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 RN7SKP19-201ENST00000516016 252 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 AC021739.1-201ENST00000559631 174 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 AC024220.1-201ENST00000603675 484 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 AC002543.1-201ENST00000299783 1954 ntBASIC3.37□□□□□ -1.87
ATG4DQ86TL0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATG4DQ86TL0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ATG4DQ86TL0 RNU1-75P-201ENST00000347264 129 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 RNU6-640P-201ENST00000363693 105 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 RNU6-1131P-201ENST00000364955 107 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 Y_RNA.348-201ENST00000365403 103 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ATG4DQ86TL0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ATG4DQ86TL0 RNA5SP201-201ENST00000410316 124 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 AL135786.1-201ENST00000415892 214 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 HMGN2P20-201ENST00000437531 273 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 RPS29P2-201ENST00000479278 136 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 SNORA70.12-201ENST00000516084 153 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 RNU6-197P-201ENST00000516680 100 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.36□□□□□ -1.87
ATG4DQ86TL0 MIR5187-201ENST00000583479 76 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 AC091178.2-201ENST00000584401 117 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 AC131055.1-201ENST00000584626 316 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 RNU1-30P-201ENST00000606575 163 ntBASIC3.36□□□□□ -1.87
ATG4DQ86TL0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATG4DQ86TL0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
ATG4DQ86TL0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 RNU6-647P-201ENST00000364243 107 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 RNU6-487P-201ENST00000365430 104 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 SNORD116-13-201ENST00000384408 92 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 MIR518C-201ENST00000384822 101 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 MIR548B-201ENST00000385247 97 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AL138878.1-201ENST00000405131 347 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 SNORA57.3-201ENST00000411095 141 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AC005300.1-201ENST00000428401 373 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 RNU7-170P-201ENST00000459303 61 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AL133162.1-201ENST00000463228 453 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AC090515.1-201ENST00000465295 476 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 RNU2-44P-201ENST00000516795 194 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AC008011.1-201ENST00000545989 227 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AC025166.1-201ENST00000612411 163 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 AP000553.6-201ENST00000641242 118 ntBASIC3.35□□□□□ -1.87
ATG4DQ86TL0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.35□□□□□ -1.87
ATG4DQ86TL0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms