Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RPL23AP46-201ENST00000438548 490 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 snoU13.22-201ENST00000459428 104 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 RPL30P5-201ENST00000494923 336 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 NDUFB9P3-201ENST00000521269 501 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 RN7SL703P-201ENST00000578485 302 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 POLR3GP1-201ENST00000594073 261 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 AC244505.7-201ENST00000599675 272 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 FAM27D1-201ENST00000612308 341 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 Z73965.1-201ENST00000623412 2297 ntBASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
FOXR1Q6PIV2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.91-201ENST00000363042 107 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 RNU6-487P-201ENST00000365430 104 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 DYNLT3P1-201ENST00000378574 347 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 RNY1P7-201ENST00000384743 110 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 PTMAP5-201ENST00000393073 333 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 MIR1263-201ENST00000408324 86 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AC017083.1-201ENST00000428093 483 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 RPS29P19-201ENST00000479709 171 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AC099522.1-202ENST00000514718 367 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 SNORA70.12-201ENST00000516084 153 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 RNU6-928P-201ENST00000516876 104 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 RNU6-1073P-201ENST00000517182 106 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 EIF4A1P12-201ENST00000551910 141 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AL022345.2-201ENST00000606307 135 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AL021707.8-201ENST00000609428 183 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 CR392039.5-201ENST00000623201 510 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AC002543.1-201ENST00000299783 1954 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AP001486.2-201ENST00000561652 5113 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 AL136360.1-201ENST00000503377 1900 ntBASIC4.05□□□□□ -1.76
FOXR1Q6PIV2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 U3.8-201ENST00000363675 217 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 SNORA70.4-201ENST00000365509 134 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 SNORA51.5-201ENST00000384126 131 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 RNU6-1181P-201ENST00000384191 106 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 AL355796.1-201ENST00000406706 323 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 AL591419.1-201ENST00000427423 339 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 AL445584.1-201ENST00000431451 330 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 S100A11P1-201ENST00000477525 312 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 RPL23AP54-201ENST00000495129 419 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 MIR6500-201ENST00000622700 86 ntBASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXR1Q6PIV2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.85-201ENST00000363014 111 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.163-201ENST00000363702 113 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 RNU4-41P-201ENST00000364426 143 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 Y_RNA.333-201ENST00000365274 102 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 RNU6-1080P-201ENST00000383982 107 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 MIR124-3-201ENST00000384866 87 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 MIR1179-201ENST00000408703 91 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 AL159169.1-201ENST00000421119 127 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 AL139281.1-201ENST00000422120 335 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 RPL39P40-201ENST00000445481 146 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 Z75741.1-201ENST00000446793 314 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 RNU6-437P-201ENST00000459408 95 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 RPS29P2-201ENST00000479278 136 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 HSPE1P5-201ENST00000561489 272 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 AC007012.1-201ENST00000567192 175 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 MIR5685-201ENST00000579080 79 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 MIR4738-201ENST00000579134 87 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 RNVU1-4-201ENST00000612985 164 ntBASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXR1Q6PIV2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.03□□□□□ -1.77
FOXR1Q6PIV2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
FOXR1Q6PIV2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 Y_RNA.52-201ENST00000362760 96 ntBASIC4.02□□□□□ -1.77
FOXR1Q6PIV2 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms